Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC10.45□□□□□ -0.74
Sssca1P56873 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Sssca1P56873 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
Sssca1P56873 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC10.45□□□□□ -0.74
Sssca1P56873 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Sssca1P56873 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC10.45□□□□□ -0.74
Sssca1P56873 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC10.45□□□□□ -0.74
Sssca1P56873 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 Gm29608-201ENSMUST00000190444 463 ntBASIC10.45□□□□□ -0.74
Sssca1P56873 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Sssca1P56873 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 Paupar-201ENSMUST00000194826 3482 ntBASIC10.45□□□□□ -0.74
Sssca1P56873 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.45□□□□□ -0.74
Sssca1P56873 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Sssca1P56873 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.45□□□□□ -0.74
Sssca1P56873 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.45□□□□□ -0.74
Sssca1P56873 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.45□□□□□ -0.74
Sssca1P56873 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.44□□□□□ -0.74
Sssca1P56873 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sssca1P56873 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sssca1P56873 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sssca1P56873 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Sssca1P56873 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sssca1P56873 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Sssca1P56873 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Sssca1P56873 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sssca1P56873 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Sssca1P56873 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sssca1P56873 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sssca1P56873 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sssca1P56873 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sssca1P56873 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sssca1P56873 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sssca1P56873 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sssca1P56873 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
Sssca1P56873 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.44□□□□□ -0.74
Sssca1P56873 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sssca1P56873 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.44□□□□□ -0.74
Sssca1P56873 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sssca1P56873 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sssca1P56873 Gm9522-201ENSMUST00000182394 926 ntBASIC10.44□□□□□ -0.74
Sssca1P56873 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sssca1P56873 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.44□□□□□ -0.74
Sssca1P56873 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC10.44□□□□□ -0.74
Sssca1P56873 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sssca1P56873 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sssca1P56873 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Sssca1P56873 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.44□□□□□ -0.74
Sssca1P56873 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sssca1P56873 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sssca1P56873 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sssca1P56873 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Sssca1P56873 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.44□□□□□ -0.74
Sssca1P56873 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.44□□□□□ -0.74
Sssca1P56873 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sssca1P56873 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sssca1P56873 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sssca1P56873 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sssca1P56873 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.44□□□□□ -0.74
Sssca1P56873 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sssca1P56873 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Sssca1P56873 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sssca1P56873 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sssca1P56873 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.43□□□□□ -0.74
Sssca1P56873 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
Sssca1P56873 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.43□□□□□ -0.74
Sssca1P56873 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.43□□□□□ -0.74
Sssca1P56873 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.43□□□□□ -0.74
Sssca1P56873 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Sssca1P56873 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Sssca1P56873 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.43□□□□□ -0.74
Sssca1P56873 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC10.43□□□□□ -0.74
Sssca1P56873 Gm13223-201ENSMUST00000118609 747 ntBASIC10.43□□□□□ -0.74
Sssca1P56873 Gm11524-201ENSMUST00000119349 807 ntBASIC10.43□□□□□ -0.74
Sssca1P56873 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Sssca1P56873 Gm11400-201ENSMUST00000120853 1214 ntBASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms