Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cdh11P55288 Gm4984-201ENSMUST00000115987 360 ntBASIC11.8□□□□□ -0.52
Cdh11P55288 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.8□□□□□ -0.52
Cdh11P55288 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.8□□□□□ -0.52
Cdh11P55288 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.8□□□□□ -0.52
Cdh11P55288 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 Mir7221-201ENSMUST00000184009 72 ntBASIC11.8□□□□□ -0.52
Cdh11P55288 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
Cdh11P55288 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.8□□□□□ -0.52
Cdh11P55288 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.8□□□□□ -0.52
Cdh11P55288 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.8□□□□□ -0.52
Cdh11P55288 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.8□□□□□ -0.52
Cdh11P55288 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Cdh11P55288 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.8□□□□□ -0.52
Cdh11P55288 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cdh11P55288 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.8□□□□□ -0.52
Cdh11P55288 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.8□□□□□ -0.52
Cdh11P55288 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.8□□□□□ -0.52
Cdh11P55288 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh11P55288 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh11P55288 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.79□□□□□ -0.52
Cdh11P55288 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh11P55288 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh11P55288 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh11P55288 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh11P55288 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh11P55288 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh11P55288 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh11P55288 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh11P55288 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh11P55288 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cdh11P55288 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh11P55288 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh11P55288 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh11P55288 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.79□□□□□ -0.52
Cdh11P55288 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh11P55288 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
Cdh11P55288 Gm15770-201ENSMUST00000117498 584 ntBASIC11.79□□□□□ -0.52
Cdh11P55288 Gm11524-201ENSMUST00000119349 807 ntBASIC11.79□□□□□ -0.52
Cdh11P55288 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.79□□□□□ -0.52
Cdh11P55288 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.79□□□□□ -0.52
Cdh11P55288 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.79□□□□□ -0.52
Cdh11P55288 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.79□□□□□ -0.52
Cdh11P55288 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.79□□□□□ -0.52
Cdh11P55288 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.79□□□□□ -0.52
Cdh11P55288 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.79□□□□□ -0.52
Cdh11P55288 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.79□□□□□ -0.52
Cdh11P55288 Gm43438-201ENSMUST00000198133 379 ntBASIC11.79□□□□□ -0.52
Cdh11P55288 Gm19078-201ENSMUST00000206311 727 ntBASIC11.79□□□□□ -0.52
Cdh11P55288 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh11P55288 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cdh11P55288 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh11P55288 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh11P55288 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.79□□□□□ -0.52
Cdh11P55288 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cdh11P55288 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh11P55288 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh11P55288 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh11P55288 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh11P55288 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh11P55288 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh11P55288 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh11P55288 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh11P55288 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh11P55288 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh11P55288 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh11P55288 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cdh11P55288 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.78□□□□□ -0.52
Cdh11P55288 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Cdh11P55288 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.78□□□□□ -0.52
Cdh11P55288 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.78□□□□□ -0.52
Cdh11P55288 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms