Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.28■□□□□ 0.2
Msh6P54276 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh6P54276 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Msh6P54276 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Msh6P54276 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh6P54276 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Msh6P54276 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.28■□□□□ 0.2
Msh6P54276 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Msh6P54276 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh6P54276 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh6P54276 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Msh6P54276 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh6P54276 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh6P54276 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh6P54276 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh6P54276 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC16.28■□□□□ 0.2
Msh6P54276 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Msh6P54276 Crry-ps-201ENSMUST00000079090 1309 ntBASIC16.28■□□□□ 0.2
Msh6P54276 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC16.27■□□□□ 0.2
Msh6P54276 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Msh6P54276 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Msh6P54276 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Msh6P54276 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC16.27■□□□□ 0.2
Msh6P54276 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh6P54276 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC16.27■□□□□ 0.2
Msh6P54276 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC16.27■□□□□ 0.2
Msh6P54276 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC16.27■□□□□ 0.2
Msh6P54276 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Msh6P54276 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh6P54276 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh6P54276 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh6P54276 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh6P54276 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh6P54276 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh6P54276 AC151895.1-201ENSMUST00000219025 1742 ntBASIC16.27■□□□□ 0.2
Msh6P54276 Gm8617-201ENSMUST00000118796 2222 ntBASIC16.27■□□□□ 0.2
Msh6P54276 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC16.27■□□□□ 0.2
Msh6P54276 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh6P54276 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Msh6P54276 CU062626.3-201ENSMUST00000225522 1411 ntBASIC16.27■□□□□ 0.2
Msh6P54276 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh6P54276 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh6P54276 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Msh6P54276 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Msh6P54276 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Msh6P54276 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Msh6P54276 Gm6992-201ENSMUST00000217973 1607 ntBASIC16.27■□□□□ 0.19
Msh6P54276 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Msh6P54276 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC16.27■□□□□ 0.19
Msh6P54276 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Msh6P54276 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.27■□□□□ 0.19
Msh6P54276 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Msh6P54276 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Msh6P54276 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Msh6P54276 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Msh6P54276 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.19
Msh6P54276 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.27■□□□□ 0.19
Msh6P54276 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Msh6P54276 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Msh6P54276 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh6P54276 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Msh6P54276 Gm13461-201ENSMUST00000120980 662 ntBASIC16.26■□□□□ 0.19
Msh6P54276 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC16.26■□□□□ 0.19
Msh6P54276 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Msh6P54276 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh6P54276 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh6P54276 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh6P54276 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh6P54276 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh6P54276 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh6P54276 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh6P54276 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Msh6P54276 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh6P54276 AC126444.1-201ENSMUST00000225938 1768 ntBASIC16.26■□□□□ 0.19
Msh6P54276 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh6P54276 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Msh6P54276 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Msh6P54276 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh6P54276 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh6P54276 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC16.26■□□□□ 0.19
Msh6P54276 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh6P54276 Gm20426-201ENSMUST00000173657 440 ntBASIC16.26■□□□□ 0.19
Msh6P54276 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC16.26■□□□□ 0.19
Msh6P54276 Gm45224-201ENSMUST00000208203 414 ntBASIC16.26■□□□□ 0.19
Msh6P54276 Gm8913-201ENSMUST00000209491 641 ntBASIC16.26■□□□□ 0.19
Msh6P54276 CT025694.1-201ENSMUST00000226188 934 ntBASIC16.26■□□□□ 0.19
Msh6P54276 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh6P54276 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh6P54276 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh6P54276 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Msh6P54276 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh6P54276 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Msh6P54276 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Msh6P54276 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh6P54276 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh6P54276 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh6P54276 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Msh6P54276 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh6P54276 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC16.25■□□□□ 0.19
Msh6P54276 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms