Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fdft1P53798 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fdft1P53798 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Fdft1P53798 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Fdft1P53798 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Fdft1P53798 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fdft1P53798 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fdft1P53798 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Fdft1P53798 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Fdft1P53798 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fdft1P53798 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Fdft1P53798 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Fdft1P53798 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Fdft1P53798 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.93□□□□□ -0.34
Fdft1P53798 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Fdft1P53798 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.93□□□□□ -0.34
Fdft1P53798 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Fdft1P53798 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.93□□□□□ -0.34
Fdft1P53798 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.93□□□□□ -0.34
Fdft1P53798 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Fdft1P53798 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.93□□□□□ -0.34
Fdft1P53798 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Fdft1P53798 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Fdft1P53798 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fdft1P53798 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Fdft1P53798 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Fdft1P53798 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fdft1P53798 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fdft1P53798 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fdft1P53798 Matn2-203ENSMUST00000226766 3252 ntBASIC12.93□□□□□ -0.34
Fdft1P53798 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.93□□□□□ -0.34
Fdft1P53798 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Fdft1P53798 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.93□□□□□ -0.34
Fdft1P53798 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Fdft1P53798 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Fdft1P53798 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fdft1P53798 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fdft1P53798 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Fdft1P53798 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fdft1P53798 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fdft1P53798 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Fdft1P53798 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Fdft1P53798 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fdft1P53798 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Fdft1P53798 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fdft1P53798 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Fdft1P53798 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fdft1P53798 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fdft1P53798 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.92□□□□□ -0.34
Fdft1P53798 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Fdft1P53798 Gm14928-201ENSMUST00000120198 477 ntBASIC12.92□□□□□ -0.34
Fdft1P53798 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.92□□□□□ -0.34
Fdft1P53798 Gm23984-201ENSMUST00000157139 203 ntBASIC12.92□□□□□ -0.34
Fdft1P53798 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Fdft1P53798 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fdft1P53798 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Fdft1P53798 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.92□□□□□ -0.34
Fdft1P53798 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Fdft1P53798 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.92□□□□□ -0.34
Fdft1P53798 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.92□□□□□ -0.34
Fdft1P53798 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.92□□□□□ -0.34
Fdft1P53798 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fdft1P53798 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Fdft1P53798 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fdft1P53798 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.92□□□□□ -0.34
Fdft1P53798 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fdft1P53798 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fdft1P53798 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fdft1P53798 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fdft1P53798 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fdft1P53798 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Fdft1P53798 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fdft1P53798 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fdft1P53798 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fdft1P53798 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fdft1P53798 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fdft1P53798 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fdft1P53798 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.92□□□□□ -0.34
Fdft1P53798 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Fdft1P53798 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fdft1P53798 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fdft1P53798 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Fdft1P53798 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fdft1P53798 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fdft1P53798 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Fdft1P53798 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fdft1P53798 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Fdft1P53798 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fdft1P53798 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fdft1P53798 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Fdft1P53798 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fdft1P53798 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fdft1P53798 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fdft1P53798 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fdft1P53798 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Fdft1P53798 Gm12928-201ENSMUST00000117115 573 ntBASIC12.91□□□□□ -0.34
Fdft1P53798 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.91□□□□□ -0.34
Fdft1P53798 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.91□□□□□ -0.34
Fdft1P53798 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.91□□□□□ -0.34
Fdft1P53798 Gm2495-201ENSMUST00000191160 466 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms