Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 AC154767.3-201ENSMUST00000225150 1342 ntBASIC10.72□□□□□ -0.69
Nkx2-1P50220 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.72□□□□□ -0.69
Nkx2-1P50220 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.72□□□□□ -0.69
Nkx2-1P50220 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-1P50220 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Gm12585-201ENSMUST00000117307 290 ntBASIC10.71□□□□□ -0.69
Nkx2-1P50220 Gm14767-201ENSMUST00000121559 586 ntBASIC10.71□□□□□ -0.69
Nkx2-1P50220 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-1P50220 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Gm5320-201ENSMUST00000207163 1519 ntBASIC10.71□□□□□ -0.69
Nkx2-1P50220 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Shd-206ENSMUST00000225145 998 ntBASIC10.71□□□□□ -0.69
Nkx2-1P50220 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Nkx2-1P50220 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.7
Nkx2-1P50220 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.7
Nkx2-1P50220 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Nkx2-1P50220 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx2-1P50220 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx2-1P50220 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.71□□□□□ -0.7
Nkx2-1P50220 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx2-1P50220 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-1P50220 AC161252.3-201ENSMUST00000225465 1549 ntBASIC10.7□□□□□ -0.7
Nkx2-1P50220 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Gm7820-201ENSMUST00000121012 1052 ntBASIC10.7□□□□□ -0.7
Nkx2-1P50220 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-1P50220 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms