Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.11□□□□□ -0.47
Sox2P48432 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Sox2P48432 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox2P48432 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.1□□□□□ -0.47
Sox2P48432 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Sox2P48432 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Sox2P48432 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.1□□□□□ -0.47
Sox2P48432 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Sox2P48432 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.1□□□□□ -0.47
Sox2P48432 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Sox2P48432 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 Gm2213-201ENSMUST00000197485 688 ntBASIC12.1□□□□□ -0.47
Sox2P48432 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.1□□□□□ -0.47
Sox2P48432 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.1□□□□□ -0.47
Sox2P48432 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.1□□□□□ -0.47
Sox2P48432 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.1□□□□□ -0.47
Sox2P48432 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.1□□□□□ -0.47
Sox2P48432 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.1□□□□□ -0.47
Sox2P48432 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.1□□□□□ -0.47
Sox2P48432 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox2P48432 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox2P48432 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox2P48432 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.09□□□□□ -0.47
Sox2P48432 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox2P48432 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox2P48432 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sox2P48432 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Sox2P48432 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox2P48432 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Sox2P48432 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox2P48432 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sox2P48432 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox2P48432 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox2P48432 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox2P48432 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox2P48432 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox2P48432 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.09□□□□□ -0.47
Sox2P48432 Gm6447-201ENSMUST00000118905 835 ntBASIC12.09□□□□□ -0.47
Sox2P48432 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.09□□□□□ -0.47
Sox2P48432 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.09□□□□□ -0.47
Sox2P48432 Gm26464-201ENSMUST00000157094 305 ntBASIC12.09□□□□□ -0.47
Sox2P48432 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox2P48432 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox2P48432 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.09□□□□□ -0.47
Sox2P48432 Gm2756-201ENSMUST00000195851 400 ntBASIC12.09□□□□□ -0.47
Sox2P48432 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.09□□□□□ -0.47
Sox2P48432 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox2P48432 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.09□□□□□ -0.47
Sox2P48432 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.09□□□□□ -0.47
Sox2P48432 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox2P48432 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox2P48432 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox2P48432 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox2P48432 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox2P48432 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox2P48432 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.09□□□□□ -0.47
Sox2P48432 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox2P48432 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox2P48432 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox2P48432 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox2P48432 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.09□□□□□ -0.47
Sox2P48432 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms