Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.14□□□□□ -0.31
Vps4bP46467 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4bP46467 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4bP46467 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4bP46467 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4bP46467 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.13□□□□□ -0.31
Vps4bP46467 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Vps4bP46467 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Vps4bP46467 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.13□□□□□ -0.31
Vps4bP46467 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.13□□□□□ -0.31
Vps4bP46467 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.13□□□□□ -0.31
Vps4bP46467 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Vps4bP46467 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 Gm16202-201ENSMUST00000117532 544 ntBASIC13.13□□□□□ -0.31
Vps4bP46467 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.13□□□□□ -0.31
Vps4bP46467 Gm11978-201ENSMUST00000122315 466 ntBASIC13.13□□□□□ -0.31
Vps4bP46467 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.13□□□□□ -0.31
Vps4bP46467 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.13□□□□□ -0.31
Vps4bP46467 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Vps4bP46467 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.13□□□□□ -0.31
Vps4bP46467 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.13□□□□□ -0.31
Vps4bP46467 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.13□□□□□ -0.31
Vps4bP46467 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.13□□□□□ -0.31
Vps4bP46467 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 Gm15823-201ENSMUST00000064305 670 ntBASIC13.13□□□□□ -0.31
Vps4bP46467 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Vps4bP46467 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Vps4bP46467 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
Vps4bP46467 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps4bP46467 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Vps4bP46467 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Vps4bP46467 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps4bP46467 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps4bP46467 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.12□□□□□ -0.31
Vps4bP46467 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps4bP46467 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps4bP46467 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.12□□□□□ -0.31
Vps4bP46467 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.12□□□□□ -0.31
Vps4bP46467 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.12□□□□□ -0.31
Vps4bP46467 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps4bP46467 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Vps4bP46467 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.12□□□□□ -0.31
Vps4bP46467 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps4bP46467 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps4bP46467 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps4bP46467 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Vps4bP46467 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.12□□□□□ -0.31
Vps4bP46467 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps4bP46467 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.12□□□□□ -0.31
Vps4bP46467 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.12□□□□□ -0.31
Vps4bP46467 Gm12138-201ENSMUST00000122180 951 ntBASIC13.12□□□□□ -0.31
Vps4bP46467 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.12□□□□□ -0.31
Vps4bP46467 Gm15429-201ENSMUST00000151268 798 ntBASIC13.12□□□□□ -0.31
Vps4bP46467 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.12□□□□□ -0.31
Vps4bP46467 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.12□□□□□ -0.31
Vps4bP46467 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps4bP46467 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.12□□□□□ -0.31
Vps4bP46467 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.12□□□□□ -0.31
Vps4bP46467 Gm37917-201ENSMUST00000194711 392 ntBASIC13.12□□□□□ -0.31
Vps4bP46467 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.12□□□□□ -0.31
Vps4bP46467 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps4bP46467 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps4bP46467 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vps4bP46467 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps4bP46467 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.12□□□□□ -0.31
Vps4bP46467 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Vps4bP46467 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps4bP46467 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Vps4bP46467 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps4bP46467 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.12□□□□□ -0.31
Vps4bP46467 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vps4bP46467 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps4bP46467 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms