Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1dP43277 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1dP43277 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1dP43277 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1dP43277 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1dP43277 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1dP43277 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Hist1h1dP43277 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Hist1h1dP43277 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC10.94□□□□□ -0.66
Hist1h1dP43277 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1dP43277 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1dP43277 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Hist1h1dP43277 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.94□□□□□ -0.66
Hist1h1dP43277 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.94□□□□□ -0.66
Hist1h1dP43277 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1dP43277 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1dP43277 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1dP43277 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1dP43277 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1dP43277 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Hist1h1dP43277 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1dP43277 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Hist1h1dP43277 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1dP43277 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1dP43277 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1dP43277 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1dP43277 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1dP43277 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hist1h1dP43277 Pck2-205ENSMUST00000226352 2784 ntBASIC10.94□□□□□ -0.66
Hist1h1dP43277 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.94□□□□□ -0.66
Hist1h1dP43277 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC10.93□□□□□ -0.66
Hist1h1dP43277 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Gm6263-201ENSMUST00000120029 1342 ntBASIC10.93□□□□□ -0.66
Hist1h1dP43277 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.93□□□□□ -0.66
Hist1h1dP43277 Gm11978-201ENSMUST00000122315 466 ntBASIC10.93□□□□□ -0.66
Hist1h1dP43277 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Gm27838-201ENSMUST00000184829 128 ntBASIC10.93□□□□□ -0.66
Hist1h1dP43277 Gm29667-201ENSMUST00000190817 490 ntBASIC10.93□□□□□ -0.66
Hist1h1dP43277 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Hist1h1dP43277 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.93□□□□□ -0.66
Hist1h1dP43277 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1dP43277 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1dP43277 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1dP43277 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1dP43277 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1dP43277 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1dP43277 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.92□□□□□ -0.66
Hist1h1dP43277 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1dP43277 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1dP43277 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1dP43277 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms