Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.25□□□□□ -0.45
Cdx2P43241 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdx2P43241 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx2P43241 Gm20426-201ENSMUST00000173657 440 ntBASIC12.25□□□□□ -0.45
Cdx2P43241 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.25□□□□□ -0.45
Cdx2P43241 Gm29787-201ENSMUST00000222129 849 ntBASIC12.25□□□□□ -0.45
Cdx2P43241 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.25□□□□□ -0.45
Cdx2P43241 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx2P43241 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cdx2P43241 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx2P43241 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx2P43241 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx2P43241 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx2P43241 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.25□□□□□ -0.45
Cdx2P43241 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx2P43241 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx2P43241 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx2P43241 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx2P43241 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx2P43241 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx2P43241 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx2P43241 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx2P43241 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cdx2P43241 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx2P43241 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx2P43241 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx2P43241 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx2P43241 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx2P43241 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx2P43241 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx2P43241 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx2P43241 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx2P43241 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx2P43241 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx2P43241 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx2P43241 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cdx2P43241 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx2P43241 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx2P43241 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cdx2P43241 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx2P43241 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cdx2P43241 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cdx2P43241 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx2P43241 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx2P43241 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Cdx2P43241 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cdx2P43241 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx2P43241 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx2P43241 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx2P43241 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cdx2P43241 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdx2P43241 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx2P43241 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdx2P43241 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.24□□□□□ -0.45
Cdx2P43241 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx2P43241 Gm45433-201ENSMUST00000209386 247 ntBASIC12.24□□□□□ -0.45
Cdx2P43241 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx2P43241 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx2P43241 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.24□□□□□ -0.45
Cdx2P43241 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdx2P43241 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx2P43241 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx2P43241 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx2P43241 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx2P43241 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx2P43241 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx2P43241 Mir339-201ENSMUST00000083659 96 ntBASIC12.24□□□□□ -0.45
Cdx2P43241 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx2P43241 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx2P43241 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx2P43241 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx2P43241 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx2P43241 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx2P43241 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx2P43241 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cdx2P43241 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx2P43241 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx2P43241 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cdx2P43241 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.23□□□□□ -0.45
Cdx2P43241 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx2P43241 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.23□□□□□ -0.45
Cdx2P43241 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx2P43241 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cdx2P43241 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx2P43241 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx2P43241 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx2P43241 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdx2P43241 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cdx2P43241 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.23□□□□□ -0.45
Cdx2P43241 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx2P43241 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx2P43241 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx2P43241 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx2P43241 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx2P43241 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx2P43241 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Cdx2P43241 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cdx2P43241 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.23□□□□□ -0.45
Cdx2P43241 Gm13461-201ENSMUST00000120980 662 ntBASIC12.23□□□□□ -0.45
Cdx2P43241 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms