Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox6P40645 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox6P40645 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox6P40645 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Sox6P40645 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox6P40645 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox6P40645 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox6P40645 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox6P40645 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox6P40645 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox6P40645 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox6P40645 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox6P40645 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox6P40645 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox6P40645 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.15□□□□□ -0.46
Sox6P40645 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox6P40645 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox6P40645 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox6P40645 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox6P40645 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox6P40645 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Sox6P40645 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.15□□□□□ -0.46
Sox6P40645 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Sox6P40645 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Sox6P40645 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox6P40645 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox6P40645 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Sox6P40645 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Sox6P40645 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox6P40645 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox6P40645 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.15□□□□□ -0.46
Sox6P40645 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox6P40645 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sox6P40645 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox6P40645 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Sox6P40645 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox6P40645 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox6P40645 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox6P40645 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox6P40645 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
Sox6P40645 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.47
Sox6P40645 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sox6P40645 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sox6P40645 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sox6P40645 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.15□□□□□ -0.47
Sox6P40645 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Sox6P40645 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.14□□□□□ -0.47
Sox6P40645 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox6P40645 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sox6P40645 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sox6P40645 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Sox6P40645 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox6P40645 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 Gm12341-201ENSMUST00000119724 503 ntBASIC12.14□□□□□ -0.47
Sox6P40645 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.14□□□□□ -0.47
Sox6P40645 Gm26464-201ENSMUST00000157094 305 ntBASIC12.14□□□□□ -0.47
Sox6P40645 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox6P40645 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.14□□□□□ -0.47
Sox6P40645 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.14□□□□□ -0.47
Sox6P40645 Gm18307-201ENSMUST00000206864 949 ntBASIC12.14□□□□□ -0.47
Sox6P40645 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.14□□□□□ -0.47
Sox6P40645 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.14□□□□□ -0.47
Sox6P40645 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.14□□□□□ -0.47
Sox6P40645 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.14□□□□□ -0.47
Sox6P40645 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox6P40645 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox6P40645 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox6P40645 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Sox6P40645 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox6P40645 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox6P40645 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox6P40645 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms