Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TfamP40630 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TfamP40630 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TfamP40630 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TfamP40630 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.53□□□□□ -0.4
TfamP40630 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.53□□□□□ -0.4
TfamP40630 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.53□□□□□ -0.4
TfamP40630 Gm15429-201ENSMUST00000151268 798 ntBASIC12.53□□□□□ -0.4
TfamP40630 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.53□□□□□ -0.4
TfamP40630 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.53□□□□□ -0.4
TfamP40630 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.53□□□□□ -0.4
TfamP40630 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.53□□□□□ -0.4
TfamP40630 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.53□□□□□ -0.4
TfamP40630 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.53□□□□□ -0.4
TfamP40630 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.53□□□□□ -0.4
TfamP40630 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TfamP40630 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TfamP40630 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TfamP40630 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TfamP40630 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TfamP40630 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.53□□□□□ -0.4
TfamP40630 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TfamP40630 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.53□□□□□ -0.4
TfamP40630 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TfamP40630 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TfamP40630 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TfamP40630 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
TfamP40630 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TfamP40630 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TfamP40630 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TfamP40630 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TfamP40630 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TfamP40630 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TfamP40630 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.52□□□□□ -0.4
TfamP40630 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
TfamP40630 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TfamP40630 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
TfamP40630 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TfamP40630 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
TfamP40630 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TfamP40630 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
TfamP40630 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.52□□□□□ -0.41
TfamP40630 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
TfamP40630 Gm12859-201ENSMUST00000117834 427 ntBASIC12.52□□□□□ -0.41
TfamP40630 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.52□□□□□ -0.41
TfamP40630 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
TfamP40630 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TfamP40630 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.52□□□□□ -0.41
TfamP40630 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.52□□□□□ -0.41
TfamP40630 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.52□□□□□ -0.41
TfamP40630 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TfamP40630 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TfamP40630 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
TfamP40630 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TfamP40630 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.52□□□□□ -0.41
TfamP40630 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TfamP40630 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TfamP40630 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
TfamP40630 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
TfamP40630 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TfamP40630 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TfamP40630 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.52□□□□□ -0.41
TfamP40630 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TfamP40630 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TfamP40630 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TfamP40630 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TfamP40630 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TfamP40630 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TfamP40630 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
TfamP40630 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TfamP40630 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TfamP40630 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.51□□□□□ -0.41
TfamP40630 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TfamP40630 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TfamP40630 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TfamP40630 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TfamP40630 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
TfamP40630 Gm7488-201ENSMUST00000117148 684 ntBASIC12.51□□□□□ -0.41
TfamP40630 Gm5687-201ENSMUST00000118252 640 ntBASIC12.51□□□□□ -0.41
TfamP40630 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.51□□□□□ -0.41
TfamP40630 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.51□□□□□ -0.41
TfamP40630 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TfamP40630 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TfamP40630 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TfamP40630 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
TfamP40630 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.51□□□□□ -0.41
TfamP40630 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.51□□□□□ -0.41
TfamP40630 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.51□□□□□ -0.41
TfamP40630 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TfamP40630 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
TfamP40630 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TfamP40630 Gm2423-201ENSMUST00000074863 733 ntBASIC12.51□□□□□ -0.41
TfamP40630 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.51□□□□□ -0.41
TfamP40630 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TfamP40630 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TfamP40630 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.51□□□□□ -0.41
TfamP40630 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TfamP40630 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.51□□□□□ -0.41
TfamP40630 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TfamP40630 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms