Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Chd1P40201 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC18.92■□□□□ 0.62
Chd1P40201 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd1P40201 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Chd1P40201 Gm43721-201ENSMUST00000199677 2313 ntBASIC18.92■□□□□ 0.62
Chd1P40201 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd1P40201 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Chd1P40201 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chd1P40201 Gm5805-201ENSMUST00000072779 456 ntBASIC18.91■□□□□ 0.62
Chd1P40201 Gm43267-201ENSMUST00000199664 1796 ntBASIC18.91■□□□□ 0.62
Chd1P40201 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd1P40201 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd1P40201 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd1P40201 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chd1P40201 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Chd1P40201 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd1P40201 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC18.91■□□□□ 0.62
Chd1P40201 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Chd1P40201 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC18.91■□□□□ 0.62
Chd1P40201 AC102368.1-201ENSMUST00000227161 892 ntBASIC18.91■□□□□ 0.62
Chd1P40201 Gm43858-201ENSMUST00000199418 1778 ntBASIC18.91■□□□□ 0.62
Chd1P40201 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd1P40201 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd1P40201 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd1P40201 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd1P40201 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Chd1P40201 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chd1P40201 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd1P40201 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd1P40201 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd1P40201 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC18.9■□□□□ 0.62
Chd1P40201 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd1P40201 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd1P40201 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd1P40201 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd1P40201 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd1P40201 Gm15207-201ENSMUST00000119259 442 ntBASIC18.9■□□□□ 0.62
Chd1P40201 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC18.9■□□□□ 0.62
Chd1P40201 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd1P40201 Gm44647-201ENSMUST00000207402 428 ntBASIC18.9■□□□□ 0.62
Chd1P40201 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chd1P40201 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC18.9■□□□□ 0.62
Chd1P40201 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC18.9■□□□□ 0.62
Chd1P40201 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC18.9■□□□□ 0.62
Chd1P40201 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Chd1P40201 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd1P40201 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chd1P40201 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd1P40201 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
Chd1P40201 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd1P40201 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd1P40201 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC18.9■□□□□ 0.62
Chd1P40201 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC18.9■□□□□ 0.62
Chd1P40201 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd1P40201 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd1P40201 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC18.9■□□□□ 0.62
Chd1P40201 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
Chd1P40201 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Chd1P40201 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Chd1P40201 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Chd1P40201 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Chd1P40201 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Chd1P40201 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Chd1P40201 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Chd1P40201 Gm23272-201ENSMUST00000104053 129 ntBASIC18.89■□□□□ 0.61
Chd1P40201 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Chd1P40201 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chd1P40201 Gm8342-201ENSMUST00000209839 757 ntBASIC18.89■□□□□ 0.61
Chd1P40201 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
Chd1P40201 Gm18499-201ENSMUST00000220808 1021 ntBASIC18.89■□□□□ 0.61
Chd1P40201 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chd1P40201 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Chd1P40201 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chd1P40201 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Chd1P40201 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chd1P40201 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC18.89■□□□□ 0.61
Chd1P40201 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Chd1P40201 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Chd1P40201 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Chd1P40201 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Chd1P40201 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Chd1P40201 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chd1P40201 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chd1P40201 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Chd1P40201 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC18.88■□□□□ 0.61
Chd1P40201 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC18.88■□□□□ 0.61
Chd1P40201 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC18.88■□□□□ 0.61
Chd1P40201 Gm9507-202ENSMUST00000180157 654 ntBASIC18.88■□□□□ 0.61
Chd1P40201 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Chd1P40201 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Chd1P40201 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Chd1P40201 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Chd1P40201 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Chd1P40201 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
Chd1P40201 Gm44056-201ENSMUST00000204623 1427 ntBASIC18.88■□□□□ 0.61
Chd1P40201 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chd1P40201 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Chd1P40201 AC154671.1-201ENSMUST00000228617 1578 ntBASIC18.88■□□□□ 0.61
Chd1P40201 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Chd1P40201 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms