Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.74□□□□□ -0.37
HmgclP38060 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
HmgclP38060 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Snord83b-201ENSMUST00000104546 94 ntBASIC12.74□□□□□ -0.37
HmgclP38060 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.74□□□□□ -0.37
HmgclP38060 Gm4984-201ENSMUST00000115987 360 ntBASIC12.74□□□□□ -0.37
HmgclP38060 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.74□□□□□ -0.37
HmgclP38060 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.74□□□□□ -0.37
HmgclP38060 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Gm7029-201ENSMUST00000173226 450 ntBASIC12.74□□□□□ -0.37
HmgclP38060 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.74□□□□□ -0.37
HmgclP38060 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.74□□□□□ -0.37
HmgclP38060 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.74□□□□□ -0.37
HmgclP38060 Gm19163-201ENSMUST00000223313 780 ntBASIC12.74□□□□□ -0.37
HmgclP38060 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Mir339-201ENSMUST00000083659 96 ntBASIC12.74□□□□□ -0.37
HmgclP38060 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
HmgclP38060 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.74□□□□□ -0.37
HmgclP38060 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.74□□□□□ -0.37
HmgclP38060 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
HmgclP38060 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.74□□□□□ -0.37
HmgclP38060 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.74□□□□□ -0.37
HmgclP38060 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.74□□□□□ -0.37
HmgclP38060 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.74□□□□□ -0.37
HmgclP38060 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HmgclP38060 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HmgclP38060 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HmgclP38060 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HmgclP38060 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
HmgclP38060 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HmgclP38060 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.73□□□□□ -0.37
HmgclP38060 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
HmgclP38060 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HmgclP38060 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HmgclP38060 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.73□□□□□ -0.37
HmgclP38060 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
HmgclP38060 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HmgclP38060 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.73□□□□□ -0.37
HmgclP38060 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HmgclP38060 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
HmgclP38060 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HmgclP38060 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
HmgclP38060 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
HmgclP38060 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.73□□□□□ -0.37
HmgclP38060 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.73□□□□□ -0.37
HmgclP38060 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HmgclP38060 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.73□□□□□ -0.37
HmgclP38060 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HmgclP38060 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HmgclP38060 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HmgclP38060 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HmgclP38060 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.73□□□□□ -0.37
HmgclP38060 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HmgclP38060 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HmgclP38060 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HmgclP38060 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
HmgclP38060 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HmgclP38060 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HmgclP38060 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
HmgclP38060 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HmgclP38060 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HmgclP38060 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HmgclP38060 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HmgclP38060 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HmgclP38060 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.73□□□□□ -0.37
HmgclP38060 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HmgclP38060 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HmgclP38060 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.73□□□□□ -0.37
HmgclP38060 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HmgclP38060 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HmgclP38060 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HmgclP38060 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HmgclP38060 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HmgclP38060 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HmgclP38060 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
HmgclP38060 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HmgclP38060 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HmgclP38060 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HmgclP38060 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.72□□□□□ -0.37
HmgclP38060 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HmgclP38060 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.72□□□□□ -0.37
HmgclP38060 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HmgclP38060 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.72□□□□□ -0.37
HmgclP38060 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HmgclP38060 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HmgclP38060 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.72□□□□□ -0.37
HmgclP38060 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms