Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Foxa1P35582 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Foxa1P35582 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Foxa1P35582 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.96□□□□□ -0.5
Foxa1P35582 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Foxa1P35582 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Foxa1P35582 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
Foxa1P35582 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Foxa1P35582 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Foxa1P35582 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Foxa1P35582 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Foxa1P35582 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.95□□□□□ -0.5
Foxa1P35582 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Foxa1P35582 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Foxa1P35582 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.95□□□□□ -0.5
Foxa1P35582 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Foxa1P35582 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Foxa1P35582 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Foxa1P35582 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Foxa1P35582 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Foxa1P35582 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Foxa1P35582 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Foxa1P35582 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Foxa1P35582 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Foxa1P35582 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.95□□□□□ -0.5
Foxa1P35582 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Foxa1P35582 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
Foxa1P35582 Gm11425-201ENSMUST00000119608 498 ntBASIC11.95□□□□□ -0.5
Foxa1P35582 Gm14704-201ENSMUST00000120300 874 ntBASIC11.95□□□□□ -0.5
Foxa1P35582 Gm1335-201ENSMUST00000121653 386 ntBASIC11.95□□□□□ -0.5
Foxa1P35582 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Foxa1P35582 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Foxa1P35582 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Foxa1P35582 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.95□□□□□ -0.5
Foxa1P35582 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.95□□□□□ -0.5
Foxa1P35582 Gm27682-201ENSMUST00000183930 110 ntBASIC11.95□□□□□ -0.5
Foxa1P35582 Gm37042-201ENSMUST00000193816 581 ntBASIC11.95□□□□□ -0.5
Foxa1P35582 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.95□□□□□ -0.5
Foxa1P35582 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.95□□□□□ -0.5
Foxa1P35582 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.95□□□□□ -0.5
Foxa1P35582 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Foxa1P35582 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Foxa1P35582 Gm9396-201ENSMUST00000076703 567 ntBASIC11.95□□□□□ -0.5
Foxa1P35582 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.95□□□□□ -0.5
Foxa1P35582 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Foxa1P35582 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Foxa1P35582 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Foxa1P35582 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Foxa1P35582 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Foxa1P35582 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Foxa1P35582 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Foxa1P35582 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Foxa1P35582 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Foxa1P35582 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Foxa1P35582 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Foxa1P35582 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxa1P35582 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxa1P35582 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Foxa1P35582 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Foxa1P35582 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxa1P35582 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxa1P35582 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.94□□□□□ -0.5
Foxa1P35582 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.94□□□□□ -0.5
Foxa1P35582 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxa1P35582 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxa1P35582 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxa1P35582 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Foxa1P35582 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Foxa1P35582 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.94□□□□□ -0.5
Foxa1P35582 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxa1P35582 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxa1P35582 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Foxa1P35582 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.94□□□□□ -0.5
Foxa1P35582 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.94□□□□□ -0.5
Foxa1P35582 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.94□□□□□ -0.5
Foxa1P35582 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Foxa1P35582 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.94□□□□□ -0.5
Foxa1P35582 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.94□□□□□ -0.5
Foxa1P35582 Gm19163-201ENSMUST00000223313 780 ntBASIC11.94□□□□□ -0.5
Foxa1P35582 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxa1P35582 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxa1P35582 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Foxa1P35582 Gm10268-201ENSMUST00000085340 555 ntBASIC11.94□□□□□ -0.5
Foxa1P35582 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxa1P35582 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxa1P35582 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Foxa1P35582 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Foxa1P35582 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.94□□□□□ -0.5
Foxa1P35582 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxa1P35582 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Foxa1P35582 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxa1P35582 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Foxa1P35582 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.94□□□□□ -0.5
Foxa1P35582 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Foxa1P35582 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Foxa1P35582 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Foxa1P35582 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Foxa1P35582 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Foxa1P35582 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Foxa1P35582 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms