Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.39□□□□□ -0.59
Cd28P31041 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cd28P31041 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Cd28P31041 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cd28P31041 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cd28P31041 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cd28P31041 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Cd28P31041 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cd28P31041 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Cd28P31041 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cd28P31041 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cd28P31041 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Cd28P31041 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cd28P31041 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cd28P31041 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cd28P31041 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cd28P31041 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Cd28P31041 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cd28P31041 Mir449b-201ENSMUST00000104833 80 ntBASIC11.38□□□□□ -0.59
Cd28P31041 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC11.38□□□□□ -0.59
Cd28P31041 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cd28P31041 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.38□□□□□ -0.59
Cd28P31041 Gm27741-201ENSMUST00000185060 237 ntBASIC11.38□□□□□ -0.59
Cd28P31041 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Cd28P31041 Gm44344-201ENSMUST00000200287 129 ntBASIC11.38□□□□□ -0.59
Cd28P31041 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cd28P31041 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC11.38□□□□□ -0.59
Cd28P31041 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cd28P31041 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cd28P31041 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cd28P31041 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cd28P31041 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Cd28P31041 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cd28P31041 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cd28P31041 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cd28P31041 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cd28P31041 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Cd28P31041 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.38□□□□□ -0.59
Cd28P31041 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cd28P31041 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Cd28P31041 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cd28P31041 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd28P31041 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd28P31041 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Cd28P31041 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd28P31041 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.37□□□□□ -0.59
Cd28P31041 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.37□□□□□ -0.59
Cd28P31041 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd28P31041 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.37□□□□□ -0.59
Cd28P31041 Gm27525-201ENSMUST00000184465 107 ntBASIC11.37□□□□□ -0.59
Cd28P31041 Gm29608-201ENSMUST00000190444 463 ntBASIC11.37□□□□□ -0.59
Cd28P31041 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd28P31041 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.37□□□□□ -0.59
Cd28P31041 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.37□□□□□ -0.59
Cd28P31041 AC225888.1-201ENSMUST00000227184 728 ntBASIC11.37□□□□□ -0.59
Cd28P31041 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd28P31041 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.37□□□□□ -0.59
Cd28P31041 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd28P31041 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd28P31041 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cd28P31041 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cd28P31041 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd28P31041 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd28P31041 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd28P31041 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.37□□□□□ -0.59
Cd28P31041 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd28P31041 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd28P31041 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cd28P31041 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cd28P31041 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cd28P31041 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd28P31041 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cd28P31041 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cd28P31041 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd28P31041 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.37□□□□□ -0.59
Cd28P31041 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd28P31041 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd28P31041 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd28P31041 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd28P31041 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd28P31041 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cd28P31041 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd28P31041 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd28P31041 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd28P31041 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd28P31041 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cd28P31041 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd28P31041 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd28P31041 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cd28P31041 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd28P31041 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cd28P31041 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd28P31041 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.36□□□□□ -0.59
Cd28P31041 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.36□□□□□ -0.59
Cd28P31041 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cd28P31041 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cd28P31041 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.36□□□□□ -0.59
Cd28P31041 Gm17795-201ENSMUST00000214505 757 ntBASIC11.36□□□□□ -0.59
Cd28P31041 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.36□□□□□ -0.59
Cd28P31041 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms