Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 Ntrk2-208ENSMUST00000225583 2719 ntBASIC10.78□□□□□ -0.68
Col8a2P25318 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col8a2P25318 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Col8a2P25318 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Col8a2P25318 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col8a2P25318 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col8a2P25318 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col8a2P25318 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col8a2P25318 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.78□□□□□ -0.68
Col8a2P25318 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col8a2P25318 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC10.78□□□□□ -0.68
Col8a2P25318 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.78□□□□□ -0.68
Col8a2P25318 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col8a2P25318 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col8a2P25318 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.78□□□□□ -0.68
Col8a2P25318 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col8a2P25318 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col8a2P25318 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Col8a2P25318 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col8a2P25318 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col8a2P25318 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col8a2P25318 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col8a2P25318 Mir1247-201ENSMUST00000116706 82 ntBASIC10.78□□□□□ -0.68
Col8a2P25318 Gm15370-201ENSMUST00000117158 253 ntBASIC10.78□□□□□ -0.68
Col8a2P25318 Gm14723-201ENSMUST00000118686 215 ntBASIC10.78□□□□□ -0.68
Col8a2P25318 Gm11637-201ENSMUST00000120601 592 ntBASIC10.78□□□□□ -0.68
Col8a2P25318 Gm13316-201ENSMUST00000140537 691 ntBASIC10.78□□□□□ -0.68
Col8a2P25318 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.78□□□□□ -0.68
Col8a2P25318 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col8a2P25318 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col8a2P25318 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.78□□□□□ -0.68
Col8a2P25318 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col8a2P25318 Gm22121-201ENSMUST00000175148 54 ntBASIC10.78□□□□□ -0.68
Col8a2P25318 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.78□□□□□ -0.68
Col8a2P25318 Olfr284-202ENSMUST00000206647 966 ntBASIC10.78□□□□□ -0.68
Col8a2P25318 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col8a2P25318 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col8a2P25318 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col8a2P25318 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col8a2P25318 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col8a2P25318 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Col8a2P25318 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col8a2P25318 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Col8a2P25318 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col8a2P25318 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col8a2P25318 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col8a2P25318 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.77□□□□□ -0.68
Col8a2P25318 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Col8a2P25318 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Col8a2P25318 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Col8a2P25318 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Col8a2P25318 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Col8a2P25318 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Col8a2P25318 Gm5939-201ENSMUST00000119613 2874 ntBASIC10.77□□□□□ -0.69
Col8a2P25318 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col8a2P25318 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col8a2P25318 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col8a2P25318 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Col8a2P25318 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col8a2P25318 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col8a2P25318 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col8a2P25318 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Col8a2P25318 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.77□□□□□ -0.69
Col8a2P25318 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.77□□□□□ -0.69
Col8a2P25318 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC10.77□□□□□ -0.69
Col8a2P25318 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.77□□□□□ -0.69
Col8a2P25318 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Col8a2P25318 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.77□□□□□ -0.69
Col8a2P25318 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Col8a2P25318 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Col8a2P25318 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.77□□□□□ -0.69
Col8a2P25318 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.77□□□□□ -0.69
Col8a2P25318 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Col8a2P25318 Gm7584-201ENSMUST00000175829 940 ntBASIC10.77□□□□□ -0.69
Col8a2P25318 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.77□□□□□ -0.69
Col8a2P25318 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.77□□□□□ -0.69
Col8a2P25318 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.77□□□□□ -0.69
Col8a2P25318 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col8a2P25318 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.77□□□□□ -0.69
Col8a2P25318 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.77□□□□□ -0.69
Col8a2P25318 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col8a2P25318 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Col8a2P25318 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col8a2P25318 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col8a2P25318 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Col8a2P25318 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Col8a2P25318 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col8a2P25318 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.77□□□□□ -0.69
Col8a2P25318 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Col8a2P25318 Gm18244-201ENSMUST00000219747 1566 ntBASIC10.77□□□□□ -0.69
Col8a2P25318 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col8a2P25318 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col8a2P25318 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col8a2P25318 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms