Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BdnfP21237 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BdnfP21237 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BdnfP21237 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.43□□□□□ -0.42
BdnfP21237 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
BdnfP21237 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
BdnfP21237 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.43□□□□□ -0.42
BdnfP21237 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BdnfP21237 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
BdnfP21237 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BdnfP21237 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.43□□□□□ -0.42
BdnfP21237 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.43□□□□□ -0.42
BdnfP21237 Gm16215-201ENSMUST00000161990 637 ntBASIC12.43□□□□□ -0.42
BdnfP21237 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.43□□□□□ -0.42
BdnfP21237 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BdnfP21237 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
BdnfP21237 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BdnfP21237 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
BdnfP21237 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
BdnfP21237 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
BdnfP21237 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BdnfP21237 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BdnfP21237 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BdnfP21237 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BdnfP21237 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.43□□□□□ -0.42
BdnfP21237 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
BdnfP21237 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.43□□□□□ -0.42
BdnfP21237 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
BdnfP21237 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
BdnfP21237 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BdnfP21237 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
BdnfP21237 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BdnfP21237 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BdnfP21237 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BdnfP21237 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BdnfP21237 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
BdnfP21237 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.42□□□□□ -0.42
BdnfP21237 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BdnfP21237 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
BdnfP21237 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BdnfP21237 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.42□□□□□ -0.42
BdnfP21237 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BdnfP21237 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.42□□□□□ -0.42
BdnfP21237 Gm22189-201ENSMUST00000103822 86 ntBASIC12.42□□□□□ -0.42
BdnfP21237 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.42□□□□□ -0.42
BdnfP21237 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.42□□□□□ -0.42
BdnfP21237 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BdnfP21237 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.42□□□□□ -0.42
BdnfP21237 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
BdnfP21237 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.42□□□□□ -0.42
BdnfP21237 Gm6218-201ENSMUST00000219812 628 ntBASIC12.42□□□□□ -0.42
BdnfP21237 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.42□□□□□ -0.42
BdnfP21237 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BdnfP21237 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BdnfP21237 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
BdnfP21237 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.42□□□□□ -0.42
BdnfP21237 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BdnfP21237 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BdnfP21237 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BdnfP21237 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.42□□□□□ -0.42
BdnfP21237 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BdnfP21237 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
BdnfP21237 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BdnfP21237 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BdnfP21237 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BdnfP21237 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BdnfP21237 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
BdnfP21237 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BdnfP21237 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BdnfP21237 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
BdnfP21237 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BdnfP21237 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BdnfP21237 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.41□□□□□ -0.42
BdnfP21237 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
BdnfP21237 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.41□□□□□ -0.42
BdnfP21237 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
BdnfP21237 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BdnfP21237 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BdnfP21237 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
BdnfP21237 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
BdnfP21237 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
BdnfP21237 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.41□□□□□ -0.42
BdnfP21237 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
BdnfP21237 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
BdnfP21237 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
BdnfP21237 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.41□□□□□ -0.42
BdnfP21237 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
BdnfP21237 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.41□□□□□ -0.42
BdnfP21237 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BdnfP21237 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.41□□□□□ -0.42
BdnfP21237 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
BdnfP21237 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.41□□□□□ -0.42
BdnfP21237 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.41□□□□□ -0.42
BdnfP21237 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.41□□□□□ -0.42
BdnfP21237 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BdnfP21237 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
BdnfP21237 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BdnfP21237 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
BdnfP21237 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BdnfP21237 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms