Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc8P09025 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc8P09025 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Hoxc8P09025 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc8P09025 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Hoxc8P09025 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc8P09025 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Hoxc8P09025 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc8P09025 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc8P09025 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.66□□□□□ -0.22
Hoxc8P09025 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc8P09025 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc8P09025 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.65□□□□□ -0.22
Hoxc8P09025 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc8P09025 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc8P09025 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc8P09025 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc8P09025 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc8P09025 Gm14263-201ENSMUST00000117955 746 ntBASIC13.65□□□□□ -0.22
Hoxc8P09025 Gm12266-201ENSMUST00000120311 962 ntBASIC13.65□□□□□ -0.22
Hoxc8P09025 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc8P09025 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.65□□□□□ -0.22
Hoxc8P09025 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc8P09025 Gm9230-201ENSMUST00000188228 532 ntBASIC13.65□□□□□ -0.22
Hoxc8P09025 Gm43378-201ENSMUST00000199336 582 ntBASIC13.65□□□□□ -0.22
Hoxc8P09025 Gm42997-202ENSMUST00000200321 985 ntBASIC13.65□□□□□ -0.22
Hoxc8P09025 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc8P09025 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc8P09025 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.65□□□□□ -0.22
Hoxc8P09025 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc8P09025 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc8P09025 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc8P09025 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc8P09025 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc8P09025 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc8P09025 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc8P09025 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.65□□□□□ -0.22
Hoxc8P09025 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Hoxc8P09025 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc8P09025 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc8P09025 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc8P09025 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc8P09025 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc8P09025 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc8P09025 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc8P09025 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Hoxc8P09025 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Hoxc8P09025 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Hoxc8P09025 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Hoxc8P09025 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxc8P09025 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxc8P09025 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Hoxc8P09025 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxc8P09025 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxc8P09025 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxc8P09025 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Hoxc8P09025 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Hoxc8P09025 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxc8P09025 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxc8P09025 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxc8P09025 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxc8P09025 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxc8P09025 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxc8P09025 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxc8P09025 Gm12380-201ENSMUST00000119012 544 ntBASIC13.64□□□□□ -0.23
Hoxc8P09025 Gm11331-201ENSMUST00000119764 288 ntBASIC13.64□□□□□ -0.23
Hoxc8P09025 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxc8P09025 Gm23119-201ENSMUST00000158610 140 ntBASIC13.64□□□□□ -0.23
Hoxc8P09025 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.64□□□□□ -0.23
Hoxc8P09025 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.64□□□□□ -0.23
Hoxc8P09025 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Hoxc8P09025 AY036118-201ENSMUST00000200021 923 ntBASIC13.64□□□□□ -0.23
Hoxc8P09025 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.64□□□□□ -0.23
Hoxc8P09025 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxc8P09025 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxc8P09025 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxc8P09025 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxc8P09025 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxc8P09025 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxc8P09025 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxc8P09025 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxc8P09025 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxc8P09025 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.64□□□□□ -0.23
Hoxc8P09025 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxc8P09025 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxc8P09025 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Hoxc8P09025 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxc8P09025 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxc8P09025 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxc8P09025 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxc8P09025 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Hoxc8P09025 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Hoxc8P09025 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxc8P09025 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxc8P09025 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxc8P09025 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxc8P09025 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxc8P09025 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxc8P09025 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxc8P09025 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms