Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
P06320 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC8.16□□□□□ -1.1
P06320 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
P06320 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
P06320 Gm18049-201ENSMUST00000208909 581 ntBASIC8.16□□□□□ -1.1
P06320 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC8.16□□□□□ -1.1
P06320 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
P06320 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
P06320 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
P06320 AC121804.3-201ENSMUST00000223420 295 ntBASIC8.16□□□□□ -1.1
P06320 Ptprm-203ENSMUST00000224091 3773 ntBASIC8.16□□□□□ -1.1
P06320 Nupl1-206ENSMUST00000225111 2936 ntBASIC8.16□□□□□ -1.1
P06320 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
P06320 AC093022.5-201ENSMUST00000226841 1079 ntBASIC8.16□□□□□ -1.1
P06320 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
P06320 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
P06320 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
P06320 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
P06320 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
P06320 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
P06320 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
P06320 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
P06320 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
P06320 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
P06320 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
P06320 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
P06320 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
P06320 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
P06320 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
P06320 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
P06320 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
P06320 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
P06320 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
P06320 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
P06320 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
P06320 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
P06320 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC8.16□□□□□ -1.1
P06320 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
P06320 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC8.15□□□□□ -1.1
P06320 CT009757.3-201ENSMUST00000223367 2320 ntBASIC8.15□□□□□ -1.1
P06320 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
P06320 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
P06320 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC8.15□□□□□ -1.1
P06320 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
P06320 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
P06320 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
P06320 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC8.15□□□□□ -1.1
P06320 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC8.15□□□□□ -1.1
P06320 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
P06320 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC8.15□□□□□ -1.1
P06320 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Gm21362-201ENSMUST00000194272 928 ntBASIC8.15□□□□□ -1.1
P06320 Gm45841-201ENSMUST00000207700 164 ntBASIC8.15□□□□□ -1.1
P06320 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC8.15□□□□□ -1.1
P06320 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC8.15□□□□□ -1.1
P06320 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Gm43102-201ENSMUST00000201004 2324 ntBASIC8.15□□□□□ -1.1
P06320 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
P06320 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC8.15□□□□□ -1.1
P06320 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
P06320 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
P06320 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC8.15□□□□□ -1.11
P06320 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
P06320 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
P06320 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms