Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PrnpP04925 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PrnpP04925 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.35□□□□□ -0.27
PrnpP04925 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PrnpP04925 Gm28450-201ENSMUST00000187349 638 ntBASIC13.35□□□□□ -0.27
PrnpP04925 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PrnpP04925 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.35□□□□□ -0.27
PrnpP04925 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PrnpP04925 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.35□□□□□ -0.27
PrnpP04925 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PrnpP04925 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.35□□□□□ -0.27
PrnpP04925 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
PrnpP04925 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PrnpP04925 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
PrnpP04925 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
PrnpP04925 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PrnpP04925 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PrnpP04925 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PrnpP04925 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PrnpP04925 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
PrnpP04925 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PrnpP04925 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PrnpP04925 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.35□□□□□ -0.27
PrnpP04925 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PrnpP04925 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PrnpP04925 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
PrnpP04925 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PrnpP04925 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.34□□□□□ -0.27
PrnpP04925 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PrnpP04925 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.34□□□□□ -0.27
PrnpP04925 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PrnpP04925 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PrnpP04925 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PrnpP04925 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
PrnpP04925 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PrnpP04925 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
PrnpP04925 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PrnpP04925 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PrnpP04925 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
PrnpP04925 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
PrnpP04925 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
PrnpP04925 Gm13296-201ENSMUST00000117854 997 ntBASIC13.34□□□□□ -0.27
PrnpP04925 Gm14999-201ENSMUST00000121039 624 ntBASIC13.34□□□□□ -0.27
PrnpP04925 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PrnpP04925 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PrnpP04925 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PrnpP04925 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC13.34□□□□□ -0.27
PrnpP04925 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PrnpP04925 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
PrnpP04925 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.34□□□□□ -0.27
PrnpP04925 Rprl1-202ENSMUST00000198476 238 ntBASIC13.34□□□□□ -0.27
PrnpP04925 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PrnpP04925 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.34□□□□□ -0.27
PrnpP04925 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PrnpP04925 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.34□□□□□ -0.27
PrnpP04925 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PrnpP04925 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PrnpP04925 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PrnpP04925 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PrnpP04925 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PrnpP04925 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.34□□□□□ -0.27
PrnpP04925 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.34□□□□□ -0.27
PrnpP04925 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PrnpP04925 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
PrnpP04925 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PrnpP04925 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
PrnpP04925 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
PrnpP04925 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
PrnpP04925 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
PrnpP04925 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.33□□□□□ -0.27
PrnpP04925 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.33□□□□□ -0.27
PrnpP04925 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.33□□□□□ -0.27
PrnpP04925 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
PrnpP04925 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PrnpP04925 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PrnpP04925 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PrnpP04925 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.33□□□□□ -0.28
PrnpP04925 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
PrnpP04925 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PrnpP04925 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
PrnpP04925 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PrnpP04925 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PrnpP04925 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PrnpP04925 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PrnpP04925 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
PrnpP04925 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
PrnpP04925 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.33□□□□□ -0.28
PrnpP04925 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.33□□□□□ -0.28
PrnpP04925 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.33□□□□□ -0.28
PrnpP04925 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PrnpP04925 Gm42997-202ENSMUST00000200321 985 ntBASIC13.33□□□□□ -0.28
PrnpP04925 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
PrnpP04925 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PrnpP04925 Gm44487-201ENSMUST00000205145 325 ntBASIC13.33□□□□□ -0.28
PrnpP04925 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.33□□□□□ -0.28
PrnpP04925 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.33□□□□□ -0.28
PrnpP04925 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.33□□□□□ -0.28
PrnpP04925 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
PrnpP04925 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PrnpP04925 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms