Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04224 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
P04224 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
P04224 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.35□□□□□ -0.59
P04224 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.35□□□□□ -0.59
P04224 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.35□□□□□ -0.59
P04224 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.35□□□□□ -0.59
P04224 Gm15460-201ENSMUST00000118147 391 ntBASIC11.35□□□□□ -0.59
P04224 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
P04224 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.35□□□□□ -0.59
P04224 Gm21470-201ENSMUST00000187680 696 ntBASIC11.35□□□□□ -0.59
P04224 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
P04224 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 AC225888.1-201ENSMUST00000227184 728 ntBASIC11.35□□□□□ -0.59
P04224 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.35□□□□□ -0.59
P04224 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
P04224 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
P04224 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.35□□□□□ -0.59
P04224 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
P04224 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.35□□□□□ -0.59
P04224 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.35□□□□□ -0.59
P04224 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.35□□□□□ -0.59
P04224 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04224 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
P04224 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04224 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
P04224 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
P04224 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04224 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
P04224 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
P04224 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.34□□□□□ -0.59
P04224 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04224 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
P04224 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
P04224 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04224 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
P04224 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
P04224 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04224 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
P04224 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.34□□□□□ -0.59
P04224 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04224 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04224 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04224 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04224 Gm22065-201ENSMUST00000103753 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm22066-201ENSMUST00000103761 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm24932-201ENSMUST00000103763 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm24115-201ENSMUST00000103799 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm22190-201ENSMUST00000103827 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm22191-201ENSMUST00000103831 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm24721-201ENSMUST00000103849 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm28018-201ENSMUST00000103869 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm26399-201ENSMUST00000103937 110 ntBASIC11.34□□□□□ -0.59
P04224 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.34□□□□□ -0.59
P04224 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.34□□□□□ -0.59
P04224 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04224 Gm25349-201ENSMUST00000177728 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm23616-201ENSMUST00000177797 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm25871-201ENSMUST00000177816 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm24752-201ENSMUST00000178240 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm24496-201ENSMUST00000178287 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm25649-201ENSMUST00000178476 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm25548-201ENSMUST00000178681 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm23147-201ENSMUST00000178841 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm26095-201ENSMUST00000179270 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm22171-201ENSMUST00000179283 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm23936-201ENSMUST00000179354 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm22619-201ENSMUST00000179516 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm25255-201ENSMUST00000179579 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm24755-201ENSMUST00000179691 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm26506-201ENSMUST00000179692 110 ntBASIC11.34□□□□□ -0.59
P04224 Gm25086-201ENSMUST00000179931 110 ntBASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms