Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Col4a1P02463 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Col4a1P02463 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Col4a1P02463 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Col4a1P02463 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col4a1P02463 Retreg1-206ENSMUST00000228306 1430 ntBASIC15.56■□□□□ 0.08
Col4a1P02463 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.56■□□□□ 0.08
Col4a1P02463 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.56■□□□□ 0.08
Col4a1P02463 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col4a1P02463 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Col4a1P02463 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Col4a1P02463 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col4a1P02463 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col4a1P02463 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col4a1P02463 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Col4a1P02463 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC15.56■□□□□ 0.08
Col4a1P02463 Gm5638-201ENSMUST00000118618 1258 ntBASIC15.56■□□□□ 0.08
Col4a1P02463 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Col4a1P02463 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC15.56■□□□□ 0.08
Col4a1P02463 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col4a1P02463 H2-Q3-201ENSMUST00000172583 608 ntBASIC15.56■□□□□ 0.08
Col4a1P02463 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC15.56■□□□□ 0.08
Col4a1P02463 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Col4a1P02463 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC15.56■□□□□ 0.08
Col4a1P02463 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC15.56■□□□□ 0.08
Col4a1P02463 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC15.56■□□□□ 0.08
Col4a1P02463 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col4a1P02463 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col4a1P02463 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col4a1P02463 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Col4a1P02463 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col4a1P02463 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col4a1P02463 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Col4a1P02463 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col4a1P02463 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col4a1P02463 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Col4a1P02463 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col4a1P02463 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col4a1P02463 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.56■□□□□ 0.08
Col4a1P02463 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col4a1P02463 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Col4a1P02463 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Col4a1P02463 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col4a1P02463 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col4a1P02463 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col4a1P02463 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Col4a1P02463 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC15.55■□□□□ 0.08
Col4a1P02463 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col4a1P02463 Gm11509-201ENSMUST00000117358 325 ntBASIC15.55■□□□□ 0.08
Col4a1P02463 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC15.55■□□□□ 0.08
Col4a1P02463 Gm13408-201ENSMUST00000119822 798 ntBASIC15.55■□□□□ 0.08
Col4a1P02463 Gm13935-201ENSMUST00000121859 798 ntBASIC15.55■□□□□ 0.08
Col4a1P02463 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC15.55■□□□□ 0.08
Col4a1P02463 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC15.55■□□□□ 0.08
Col4a1P02463 Gm27627-201ENSMUST00000183644 150 ntBASIC15.55■□□□□ 0.08
Col4a1P02463 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC15.55■□□□□ 0.08
Col4a1P02463 Aprt-ps-201ENSMUST00000212311 505 ntBASIC15.55■□□□□ 0.08
Col4a1P02463 AC107638.1-201ENSMUST00000213690 1061 ntBASIC15.55■□□□□ 0.08
Col4a1P02463 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC15.55■□□□□ 0.08
Col4a1P02463 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.55■□□□□ 0.08
Col4a1P02463 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col4a1P02463 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col4a1P02463 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Col4a1P02463 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col4a1P02463 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Col4a1P02463 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col4a1P02463 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col4a1P02463 Zkscan3-207ENSMUST00000223831 2101 ntBASIC15.55■□□□□ 0.08
Col4a1P02463 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Col4a1P02463 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Col4a1P02463 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col4a1P02463 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col4a1P02463 Mir680-2-201ENSMUST00000102163 110 ntBASIC15.54■□□□□ 0.08
Col4a1P02463 Gm23251-201ENSMUST00000103773 110 ntBASIC15.54■□□□□ 0.08
Col4a1P02463 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col4a1P02463 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col4a1P02463 Gm13035-201ENSMUST00000117496 342 ntBASIC15.54■□□□□ 0.08
Col4a1P02463 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col4a1P02463 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col4a1P02463 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC15.54■□□□□ 0.08
Col4a1P02463 Olfr1347-205ENSMUST00000220413 964 ntBASIC15.54■□□□□ 0.08
Col4a1P02463 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col4a1P02463 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Col4a1P02463 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC15.54■□□□□ 0.08
Col4a1P02463 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col4a1P02463 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC15.54■□□□□ 0.08
Col4a1P02463 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col4a1P02463 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col4a1P02463 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col4a1P02463 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col4a1P02463 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col4a1P02463 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col4a1P02463 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Col4a1P02463 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col4a1P02463 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col4a1P02463 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col4a1P02463 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col4a1P02463 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col4a1P02463 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col4a1P02463 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms