Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Gm19931-201ENSMUST00000198920 368 ntBASIC11.84□□□□□ -0.51
P01852 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.84□□□□□ -0.51
P01852 Gm40466-201ENSMUST00000212174 422 ntBASIC11.84□□□□□ -0.51
P01852 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.84□□□□□ -0.51
P01852 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.84□□□□□ -0.51
P01852 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.84□□□□□ -0.51
P01852 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
P01852 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.84□□□□□ -0.51
P01852 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01852 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.84□□□□□ -0.51
P01852 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.84□□□□□ -0.51
P01852 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.84□□□□□ -0.51
P01852 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
P01852 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01852 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01852 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.84□□□□□ -0.51
P01852 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01852 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.84□□□□□ -0.51
P01852 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01852 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01852 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01852 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
P01852 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
P01852 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.83□□□□□ -0.51
P01852 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.83□□□□□ -0.51
P01852 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
P01852 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P01852 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P01852 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01852 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01852 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
P01852 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01852 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.83□□□□□ -0.52
P01852 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01852 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01852 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
P01852 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01852 Gm12384-201ENSMUST00000119228 919 ntBASIC11.83□□□□□ -0.52
P01852 Gm14660-201ENSMUST00000119809 575 ntBASIC11.83□□□□□ -0.52
P01852 Gm16177-201ENSMUST00000120728 718 ntBASIC11.83□□□□□ -0.52
P01852 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P01852 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P01852 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P01852 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
P01852 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.83□□□□□ -0.52
P01852 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P01852 Gm28693-202ENSMUST00000190758 331 ntBASIC11.83□□□□□ -0.52
P01852 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
P01852 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
P01852 Gm6458-201ENSMUST00000211573 635 ntBASIC11.83□□□□□ -0.52
P01852 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01852 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01852 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01852 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.83□□□□□ -0.52
P01852 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.83□□□□□ -0.52
P01852 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01852 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01852 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01852 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.83□□□□□ -0.52
P01852 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01852 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
P01852 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01852 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
P01852 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01852 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01852 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P01852 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01852 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.83□□□□□ -0.52
P01852 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01852 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01852 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P01852 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01852 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01852 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01852 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
P01852 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.82□□□□□ -0.52
P01852 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.82□□□□□ -0.52
P01852 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.82□□□□□ -0.52
P01852 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
P01852 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01852 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01852 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01852 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01852 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
P01852 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.82□□□□□ -0.52
P01852 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P01852 Gm11637-201ENSMUST00000120601 592 ntBASIC11.82□□□□□ -0.52
P01852 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P01852 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.82□□□□□ -0.52
P01852 Snora78-201ENSMUST00000158630 128 ntBASIC11.82□□□□□ -0.52
P01852 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P01852 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
P01852 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P01852 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01852 Gm10146-201ENSMUST00000072739 309 ntBASIC11.82□□□□□ -0.52
P01852 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01852 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01852 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01852 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01852 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms