Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 AC166997.1-201ENSMUST00000225122 572 ntBASIC9.44□□□□□ -0.9
TcraP01849 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
TcraP01849 Gm13332-201ENSMUST00000120451 1398 ntBASIC9.44□□□□□ -0.9
TcraP01849 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
TcraP01849 Gm5648-201ENSMUST00000122244 1587 ntBASIC9.44□□□□□ -0.9
TcraP01849 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC9.44□□□□□ -0.9
TcraP01849 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
TcraP01849 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC9.43□□□□□ -0.9
TcraP01849 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
TcraP01849 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
TcraP01849 Gm45266-201ENSMUST00000210111 2173 ntBASIC9.43□□□□□ -0.9
TcraP01849 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
TcraP01849 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
TcraP01849 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC9.43□□□□□ -0.9
TcraP01849 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
TcraP01849 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC9.43□□□□□ -0.9
TcraP01849 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
TcraP01849 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
TcraP01849 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Gm25287-201ENSMUST00000103846 110 ntBASIC9.43□□□□□ -0.9
TcraP01849 Gm22918-201ENSMUST00000103855 110 ntBASIC9.43□□□□□ -0.9
TcraP01849 Gm6539-201ENSMUST00000119157 1064 ntBASIC9.43□□□□□ -0.9
TcraP01849 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC9.43□□□□□ -0.9
TcraP01849 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC9.43□□□□□ -0.9
TcraP01849 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC9.43□□□□□ -0.9
TcraP01849 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Gm43125-201ENSMUST00000201724 730 ntBASIC9.43□□□□□ -0.9
TcraP01849 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC9.43□□□□□ -0.9
TcraP01849 CT943659.1-201ENSMUST00000215459 326 ntBASIC9.43□□□□□ -0.9
TcraP01849 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC9.43□□□□□ -0.9
TcraP01849 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 AC093022.5-201ENSMUST00000226841 1079 ntBASIC9.43□□□□□ -0.9
TcraP01849 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
TcraP01849 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
TcraP01849 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
TcraP01849 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC9.43□□□□□ -0.9
TcraP01849 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC9.43□□□□□ -0.9
TcraP01849 Gm27177-202ENSMUST00000183514 2703 ntBASIC9.43□□□□□ -0.9
TcraP01849 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC9.43□□□□□ -0.9
TcraP01849 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
TcraP01849 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TcraP01849 Gm43045-201ENSMUST00000198725 2095 ntBASIC9.43□□□□□ -0.9
TcraP01849 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
TcraP01849 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
TcraP01849 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms