Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Gm37042-201ENSMUST00000193816 581 ntBASIC11.17□□□□□ -0.62
Igh-VJ558P01758 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.17□□□□□ -0.62
Igh-VJ558P01758 Gm10146-201ENSMUST00000072739 309 ntBASIC11.17□□□□□ -0.62
Igh-VJ558P01758 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.17□□□□□ -0.62
Igh-VJ558P01758 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Igh-VJ558P01758 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igh-VJ558P01758 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igh-VJ558P01758 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Igh-VJ558P01758 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igh-VJ558P01758 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Igh-VJ558P01758 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igh-VJ558P01758 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igh-VJ558P01758 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igh-VJ558P01758 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Igh-VJ558P01758 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igh-VJ558P01758 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igh-VJ558P01758 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.17□□□□□ -0.62
Igh-VJ558P01758 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igh-VJ558P01758 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Gm22331-201ENSMUST00000158066 136 ntBASIC11.16□□□□□ -0.62
Igh-VJ558P01758 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Gm5035-201ENSMUST00000215581 927 ntBASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.16□□□□□ -0.62
Igh-VJ558P01758 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Gm17208-201ENSMUST00000168388 535 ntBASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Gm27486-201ENSMUST00000184923 80 ntBASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Gm8099-201ENSMUST00000200510 742 ntBASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Gm7561-201ENSMUST00000211203 886 ntBASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Gm29705-201ENSMUST00000212598 474 ntBASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms