Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.96□□□□□ -0.17
Vti1aO89116 Gm26083-201ENSMUST00000157904 193 ntBASIC13.96□□□□□ -0.17
Vti1aO89116 Gm27320-201ENSMUST00000184892 109 ntBASIC13.96□□□□□ -0.17
Vti1aO89116 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.96□□□□□ -0.17
Vti1aO89116 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.96□□□□□ -0.17
Vti1aO89116 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vti1aO89116 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vti1aO89116 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vti1aO89116 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.17
Vti1aO89116 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vti1aO89116 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vti1aO89116 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
Vti1aO89116 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vti1aO89116 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vti1aO89116 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vti1aO89116 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vti1aO89116 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vti1aO89116 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1aO89116 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.95□□□□□ -0.18
Vti1aO89116 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1aO89116 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1aO89116 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1aO89116 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1aO89116 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Vti1aO89116 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1aO89116 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1aO89116 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Vti1aO89116 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.95□□□□□ -0.18
Vti1aO89116 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.95□□□□□ -0.18
Vti1aO89116 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1aO89116 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Vti1aO89116 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.95□□□□□ -0.18
Vti1aO89116 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1aO89116 Gm16479-201ENSMUST00000121706 932 ntBASIC13.95□□□□□ -0.18
Vti1aO89116 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1aO89116 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1aO89116 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.95□□□□□ -0.18
Vti1aO89116 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1aO89116 Mir7221-201ENSMUST00000184009 72 ntBASIC13.95□□□□□ -0.18
Vti1aO89116 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Vti1aO89116 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.95□□□□□ -0.18
Vti1aO89116 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.95□□□□□ -0.18
Vti1aO89116 Gm19163-201ENSMUST00000223313 780 ntBASIC13.95□□□□□ -0.18
Vti1aO89116 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.95□□□□□ -0.18
Vti1aO89116 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.95□□□□□ -0.18
Vti1aO89116 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1aO89116 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.95□□□□□ -0.18
Vti1aO89116 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1aO89116 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1aO89116 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1aO89116 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1aO89116 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Vti1aO89116 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1aO89116 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1aO89116 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1aO89116 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1aO89116 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1aO89116 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Vti1aO89116 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC13.95□□□□□ -0.18
Vti1aO89116 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1aO89116 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1aO89116 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1aO89116 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1aO89116 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1aO89116 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1aO89116 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1aO89116 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1aO89116 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.94□□□□□ -0.18
Vti1aO89116 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Vti1aO89116 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.94□□□□□ -0.18
Vti1aO89116 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1aO89116 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1aO89116 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Vti1aO89116 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Vti1aO89116 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1aO89116 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.94□□□□□ -0.18
Vti1aO89116 Gm15808-201ENSMUST00000119046 604 ntBASIC13.94□□□□□ -0.18
Vti1aO89116 Gm14381-201ENSMUST00000122105 414 ntBASIC13.94□□□□□ -0.18
Vti1aO89116 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1aO89116 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1aO89116 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.94□□□□□ -0.18
Vti1aO89116 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Vti1aO89116 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1aO89116 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1aO89116 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.94□□□□□ -0.18
Vti1aO89116 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.94□□□□□ -0.18
Vti1aO89116 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1aO89116 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1aO89116 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1aO89116 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1aO89116 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Vti1aO89116 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Vti1aO89116 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1aO89116 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
Vti1aO89116 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.94□□□□□ -0.18
Vti1aO89116 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1aO89116 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1aO89116 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.94□□□□□ -0.18
Vti1aO89116 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1aO89116 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms