Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smarce1O54941 Gm16372-201ENSMUST00000073088 450 ntBASIC15.36■□□□□ 0.05
Smarce1O54941 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smarce1O54941 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smarce1O54941 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smarce1O54941 Gm42480-201ENSMUST00000198434 2595 ntBASIC15.36■□□□□ 0.05
Smarce1O54941 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smarce1O54941 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smarce1O54941 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Smarce1O54941 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Smarce1O54941 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smarce1O54941 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Smarce1O54941 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC15.36■□□□□ 0.05
Smarce1O54941 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Smarce1O54941 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smarce1O54941 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smarce1O54941 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smarce1O54941 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.36■□□□□ 0.05
Smarce1O54941 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Smarce1O54941 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
Smarce1O54941 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.35■□□□□ 0.05
Smarce1O54941 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarce1O54941 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarce1O54941 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smarce1O54941 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarce1O54941 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarce1O54941 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Smarce1O54941 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Smarce1O54941 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarce1O54941 AC117194.1-201ENSMUST00000224847 3002 ntBASIC15.35■□□□□ 0.05
Smarce1O54941 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarce1O54941 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarce1O54941 Gm14350-201ENSMUST00000116642 640 ntBASIC15.35■□□□□ 0.05
Smarce1O54941 Gm14057-201ENSMUST00000120631 482 ntBASIC15.35■□□□□ 0.05
Smarce1O54941 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.35■□□□□ 0.05
Smarce1O54941 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smarce1O54941 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.35■□□□□ 0.05
Smarce1O54941 Gm16215-201ENSMUST00000161990 637 ntBASIC15.35■□□□□ 0.05
Smarce1O54941 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.35■□□□□ 0.05
Smarce1O54941 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smarce1O54941 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smarce1O54941 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.35■□□□□ 0.05
Smarce1O54941 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.35■□□□□ 0.05
Smarce1O54941 Gm20949-201ENSMUST00000206478 952 ntBASIC15.35■□□□□ 0.05
Smarce1O54941 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC15.35■□□□□ 0.05
Smarce1O54941 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.35■□□□□ 0.05
Smarce1O54941 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.35■□□□□ 0.05
Smarce1O54941 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarce1O54941 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarce1O54941 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarce1O54941 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarce1O54941 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarce1O54941 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Smarce1O54941 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.35■□□□□ 0.05
Smarce1O54941 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC15.35■□□□□ 0.05
Smarce1O54941 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarce1O54941 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smarce1O54941 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarce1O54941 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Smarce1O54941 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smarce1O54941 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smarce1O54941 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Smarce1O54941 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Smarce1O54941 Gm42829-201ENSMUST00000198417 2585 ntBASIC15.34■□□□□ 0.05
Smarce1O54941 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Smarce1O54941 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Smarce1O54941 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarce1O54941 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarce1O54941 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarce1O54941 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.34■□□□□ 0.05
Smarce1O54941 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarce1O54941 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC15.34■□□□□ 0.05
Smarce1O54941 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarce1O54941 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.34■□□□□ 0.05
Smarce1O54941 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Smarce1O54941 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC15.34■□□□□ 0.05
Smarce1O54941 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Smarce1O54941 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.34■□□□□ 0.05
Smarce1O54941 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.34■□□□□ 0.05
Smarce1O54941 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.34■□□□□ 0.05
Smarce1O54941 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarce1O54941 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarce1O54941 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarce1O54941 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smarce1O54941 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarce1O54941 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarce1O54941 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Smarce1O54941 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarce1O54941 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarce1O54941 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Smarce1O54941 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarce1O54941 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smarce1O54941 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarce1O54941 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarce1O54941 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarce1O54941 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarce1O54941 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smarce1O54941 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smarce1O54941 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smarce1O54941 Gm27196-201ENSMUST00000184787 2582 ntBASIC15.33■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms