Protein–RNA interactions for Protein: O35874

Slc1a4, Neutral amino acid transporter A, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a4O35874 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc1a4O35874 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc1a4O35874 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc1a4O35874 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC15.19■□□□□ 0.02
Slc1a4O35874 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc1a4O35874 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.19■□□□□ 0.02
Slc1a4O35874 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC15.19■□□□□ 0.02
Slc1a4O35874 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc1a4O35874 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slc1a4O35874 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc1a4O35874 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15.18■□□□□ 0.02
Slc1a4O35874 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Slc1a4O35874 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.18■□□□□ 0.02
Slc1a4O35874 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Slc1a4O35874 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc1a4O35874 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Slc1a4O35874 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc1a4O35874 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc1a4O35874 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC15.18■□□□□ 0.02
Slc1a4O35874 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Slc1a4O35874 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Slc1a4O35874 CU024892.2-201ENSMUST00000224608 832 ntBASIC15.18■□□□□ 0.02
Slc1a4O35874 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc1a4O35874 Gm9823-201ENSMUST00000051212 327 ntBASIC15.18■□□□□ 0.02
Slc1a4O35874 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.18■□□□□ 0.02
Slc1a4O35874 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc1a4O35874 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Slc1a4O35874 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc1a4O35874 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc1a4O35874 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc1a4O35874 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Slc1a4O35874 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Slc1a4O35874 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc1a4O35874 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc1a4O35874 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.17■□□□□ 0.02
Slc1a4O35874 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Slc1a4O35874 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc1a4O35874 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC15.17■□□□□ 0.02
Slc1a4O35874 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc1a4O35874 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc1a4O35874 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc1a4O35874 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Slc1a4O35874 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc1a4O35874 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc1a4O35874 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc1a4O35874 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc1a4O35874 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Slc1a4O35874 Gm14704-201ENSMUST00000120300 874 ntBASIC15.17■□□□□ 0.02
Slc1a4O35874 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.17■□□□□ 0.02
Slc1a4O35874 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC15.17■□□□□ 0.02
Slc1a4O35874 Gm22121-201ENSMUST00000175148 54 ntBASIC15.17■□□□□ 0.02
Slc1a4O35874 Gm6013-201ENSMUST00000212264 699 ntBASIC15.17■□□□□ 0.02
Slc1a4O35874 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.17■□□□□ 0.02
Slc1a4O35874 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc1a4O35874 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Slc1a4O35874 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc1a4O35874 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc1a4O35874 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Slc1a4O35874 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc1a4O35874 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc1a4O35874 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc1a4O35874 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc1a4O35874 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc1a4O35874 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc1a4O35874 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Slc1a4O35874 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Slc1a4O35874 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc1a4O35874 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Slc1a4O35874 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Slc1a4O35874 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc1a4O35874 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC15.16■□□□□ 0.02
Slc1a4O35874 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Slc1a4O35874 Gm5940-201ENSMUST00000117582 1068 ntBASIC15.16■□□□□ 0.02
Slc1a4O35874 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
Slc1a4O35874 Gm7809-201ENSMUST00000153199 742 ntBASIC15.16■□□□□ 0.02
Slc1a4O35874 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc1a4O35874 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Slc1a4O35874 Gm43133-201ENSMUST00000197472 463 ntBASIC15.16■□□□□ 0.02
Slc1a4O35874 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc1a4O35874 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.16■□□□□ 0.02
Slc1a4O35874 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.16■□□□□ 0.02
Slc1a4O35874 Gm32025-201ENSMUST00000217960 307 ntBASIC15.16■□□□□ 0.02
Slc1a4O35874 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.16■□□□□ 0.02
Slc1a4O35874 AC154462.2-201ENSMUST00000227519 370 ntBASIC15.16■□□□□ 0.02
Slc1a4O35874 Gm7399-201ENSMUST00000032395 858 ntBASIC15.16■□□□□ 0.02
Slc1a4O35874 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc1a4O35874 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc1a4O35874 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC15.16■□□□□ 0.02
Slc1a4O35874 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc1a4O35874 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc1a4O35874 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Slc1a4O35874 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Slc1a4O35874 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc1a4O35874 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.16■□□□□ 0.02
Slc1a4O35874 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc1a4O35874 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc1a4O35874 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc1a4O35874 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.16■□□□□ 0.02
Slc1a4O35874 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc1a4O35874 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 100.6 ms