Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6bO35451 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6bO35451 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6bO35451 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.26□□□□□ -0.61
Atf6bO35451 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Atf6bO35451 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6bO35451 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6bO35451 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.26□□□□□ -0.61
Atf6bO35451 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.26□□□□□ -0.61
Atf6bO35451 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.26□□□□□ -0.61
Atf6bO35451 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.26□□□□□ -0.61
Atf6bO35451 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.26□□□□□ -0.61
Atf6bO35451 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.26□□□□□ -0.61
Atf6bO35451 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6bO35451 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.26□□□□□ -0.61
Atf6bO35451 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6bO35451 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.26□□□□□ -0.61
Atf6bO35451 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.26□□□□□ -0.61
Atf6bO35451 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6bO35451 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6bO35451 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6bO35451 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6bO35451 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6bO35451 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.26□□□□□ -0.61
Atf6bO35451 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6bO35451 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6bO35451 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6bO35451 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6bO35451 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6bO35451 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6bO35451 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.26□□□□□ -0.61
Atf6bO35451 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6bO35451 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6bO35451 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6bO35451 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6bO35451 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atf6bO35451 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.26□□□□□ -0.61
Atf6bO35451 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.26□□□□□ -0.61
Atf6bO35451 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.26□□□□□ -0.61
Atf6bO35451 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6bO35451 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Atf6bO35451 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6bO35451 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6bO35451 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6bO35451 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6bO35451 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Atf6bO35451 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6bO35451 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Atf6bO35451 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6bO35451 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Atf6bO35451 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6bO35451 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6bO35451 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6bO35451 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6bO35451 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6bO35451 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6bO35451 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6bO35451 Gm6447-201ENSMUST00000118905 835 ntBASIC11.25□□□□□ -0.61
Atf6bO35451 Gm11803-201ENSMUST00000119966 444 ntBASIC11.25□□□□□ -0.61
Atf6bO35451 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6bO35451 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.25□□□□□ -0.61
Atf6bO35451 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Atf6bO35451 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Atf6bO35451 Proscos-202ENSMUST00000178990 666 ntBASIC11.25□□□□□ -0.61
Atf6bO35451 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Atf6bO35451 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6bO35451 Gm43433-201ENSMUST00000196573 481 ntBASIC11.25□□□□□ -0.61
Atf6bO35451 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.25□□□□□ -0.61
Atf6bO35451 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.25□□□□□ -0.61
Atf6bO35451 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6bO35451 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6bO35451 Gm10012-201ENSMUST00000078252 192 ntBASIC11.25□□□□□ -0.61
Atf6bO35451 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6bO35451 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6bO35451 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.25□□□□□ -0.61
Atf6bO35451 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.25□□□□□ -0.61
Atf6bO35451 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6bO35451 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Atf6bO35451 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6bO35451 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6bO35451 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.25□□□□□ -0.61
Atf6bO35451 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Atf6bO35451 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6bO35451 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6bO35451 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6bO35451 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6bO35451 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Atf6bO35451 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.25□□□□□ -0.61
Atf6bO35451 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6bO35451 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6bO35451 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Atf6bO35451 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Atf6bO35451 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atf6bO35451 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atf6bO35451 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Atf6bO35451 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Atf6bO35451 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atf6bO35451 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Atf6bO35451 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atf6bO35451 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms