Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.92□□□□□ -0.66
Prrt1O35449 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prrt1O35449 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prrt1O35449 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prrt1O35449 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Prrt1O35449 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Prrt1O35449 Gm38037-201ENSMUST00000192600 1624 ntBASIC10.92□□□□□ -0.66
Prrt1O35449 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prrt1O35449 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prrt1O35449 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prrt1O35449 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prrt1O35449 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prrt1O35449 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Prrt1O35449 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC10.92□□□□□ -0.66
Prrt1O35449 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC10.92□□□□□ -0.66
Prrt1O35449 Gm18889-201ENSMUST00000174284 929 ntBASIC10.92□□□□□ -0.66
Prrt1O35449 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC10.92□□□□□ -0.66
Prrt1O35449 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC10.92□□□□□ -0.66
Prrt1O35449 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC10.92□□□□□ -0.66
Prrt1O35449 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prrt1O35449 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Prrt1O35449 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prrt1O35449 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prrt1O35449 Gm37015-201ENSMUST00000192763 1521 ntBASIC10.92□□□□□ -0.66
Prrt1O35449 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prrt1O35449 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.92□□□□□ -0.66
Prrt1O35449 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prrt1O35449 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Prrt1O35449 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Prrt1O35449 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prrt1O35449 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Prrt1O35449 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prrt1O35449 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prrt1O35449 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.92□□□□□ -0.66
Prrt1O35449 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Prrt1O35449 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prrt1O35449 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Prrt1O35449 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prrt1O35449 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Prrt1O35449 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prrt1O35449 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prrt1O35449 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Prrt1O35449 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prrt1O35449 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Prrt1O35449 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Prrt1O35449 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prrt1O35449 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prrt1O35449 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Prrt1O35449 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prrt1O35449 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prrt1O35449 Gm12537-201ENSMUST00000119266 1002 ntBASIC10.91□□□□□ -0.66
Prrt1O35449 Gm12070-201ENSMUST00000119551 1002 ntBASIC10.91□□□□□ -0.66
Prrt1O35449 Gm12671-201ENSMUST00000119978 1002 ntBASIC10.91□□□□□ -0.66
Prrt1O35449 Gm13292-201ENSMUST00000120014 1000 ntBASIC10.91□□□□□ -0.66
Prrt1O35449 Gm7820-201ENSMUST00000121012 1052 ntBASIC10.91□□□□□ -0.66
Prrt1O35449 Gm12403-201ENSMUST00000121384 959 ntBASIC10.91□□□□□ -0.66
Prrt1O35449 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prrt1O35449 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC10.91□□□□□ -0.66
Prrt1O35449 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prrt1O35449 Gm18733-201ENSMUST00000173950 856 ntBASIC10.91□□□□□ -0.66
Prrt1O35449 Gm10359-201ENSMUST00000180167 1002 ntBASIC10.91□□□□□ -0.66
Prrt1O35449 Gm12033-201ENSMUST00000180654 1002 ntBASIC10.91□□□□□ -0.66
Prrt1O35449 Gm5559-201ENSMUST00000180755 1002 ntBASIC10.91□□□□□ -0.66
Prrt1O35449 Gm4335-201ENSMUST00000182581 1004 ntBASIC10.91□□□□□ -0.66
Prrt1O35449 Gm18905-201ENSMUST00000205454 928 ntBASIC10.91□□□□□ -0.66
Prrt1O35449 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Prrt1O35449 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Prrt1O35449 Bloc1s5-203ENSMUST00000224902 612 ntBASIC10.91□□□□□ -0.66
Prrt1O35449 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prrt1O35449 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Prrt1O35449 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prrt1O35449 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prrt1O35449 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prrt1O35449 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prrt1O35449 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prrt1O35449 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prrt1O35449 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prrt1O35449 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prrt1O35449 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prrt1O35449 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Prrt1O35449 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prrt1O35449 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Prrt1O35449 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prrt1O35449 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prrt1O35449 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.9□□□□□ -0.66
Prrt1O35449 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Prrt1O35449 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prrt1O35449 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.9□□□□□ -0.66
Prrt1O35449 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prrt1O35449 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Prrt1O35449 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prrt1O35449 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prrt1O35449 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prrt1O35449 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.9□□□□□ -0.66
Prrt1O35449 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Prrt1O35449 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prrt1O35449 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Prrt1O35449 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prrt1O35449 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Prrt1O35449 Mir1897-201ENSMUST00000122581 272 ntBASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms