Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Ginm1-202ENSMUST00000065124 300 ntBASIC19.51■□□□□ 0.71
Polr1aO35134 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Polr1aO35134 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Polr1aO35134 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Polr1aO35134 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Polr1aO35134 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC19.5■□□□□ 0.71
Polr1aO35134 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Polr1aO35134 Gm8617-201ENSMUST00000118796 2222 ntBASIC19.5■□□□□ 0.71
Polr1aO35134 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Polr1aO35134 AC148324.1-201ENSMUST00000219034 4240 ntBASIC19.5■□□□□ 0.71
Polr1aO35134 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Polr1aO35134 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC19.5■□□□□ 0.71
Polr1aO35134 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Polr1aO35134 Gm8343-201ENSMUST00000182705 994 ntBASIC19.5■□□□□ 0.71
Polr1aO35134 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC19.5■□□□□ 0.71
Polr1aO35134 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC19.5■□□□□ 0.71
Polr1aO35134 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC19.5■□□□□ 0.71
Polr1aO35134 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Polr1aO35134 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Polr1aO35134 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Polr1aO35134 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Polr1aO35134 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Polr1aO35134 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Polr1aO35134 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Polr1aO35134 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Polr1aO35134 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Polr1aO35134 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Polr1aO35134 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Polr1aO35134 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Polr1aO35134 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Polr1aO35134 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Polr1aO35134 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC19.49■□□□□ 0.71
Polr1aO35134 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Polr1aO35134 Gm14760-201ENSMUST00000121831 999 ntBASIC19.49■□□□□ 0.71
Polr1aO35134 Cd63-ps-202ENSMUST00000154992 717 ntBASIC19.49■□□□□ 0.71
Polr1aO35134 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Polr1aO35134 Gm42682-201ENSMUST00000198349 1265 ntBASIC19.49■□□□□ 0.71
Polr1aO35134 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC19.49■□□□□ 0.71
Polr1aO35134 AC122876.1-201ENSMUST00000217619 825 ntBASIC19.49■□□□□ 0.71
Polr1aO35134 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Polr1aO35134 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Polr1aO35134 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Polr1aO35134 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Polr1aO35134 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Polr1aO35134 Gm44851-201ENSMUST00000205735 2309 ntBASIC19.49■□□□□ 0.71
Polr1aO35134 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Polr1aO35134 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Polr1aO35134 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC19.49■□□□□ 0.71
Polr1aO35134 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Polr1aO35134 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Polr1aO35134 Gm5939-201ENSMUST00000119613 2874 ntBASIC19.48■□□□□ 0.71
Polr1aO35134 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Polr1aO35134 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Polr1aO35134 Gm11509-201ENSMUST00000117358 325 ntBASIC19.48■□□□□ 0.71
Polr1aO35134 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC19.48■□□□□ 0.71
Polr1aO35134 AC166992.1-201ENSMUST00000216356 565 ntBASIC19.48■□□□□ 0.71
Polr1aO35134 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC19.48■□□□□ 0.71
Polr1aO35134 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Polr1aO35134 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC19.48■□□□□ 0.71
Polr1aO35134 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Polr1aO35134 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Polr1aO35134 Gm44401-201ENSMUST00000204462 2375 ntBASIC19.48■□□□□ 0.71
Polr1aO35134 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Polr1aO35134 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Polr1aO35134 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Polr1aO35134 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Polr1aO35134 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Polr1aO35134 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Polr1aO35134 Gm14150-201ENSMUST00000122404 1354 ntBASIC19.48■□□□□ 0.71
Polr1aO35134 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Polr1aO35134 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Polr1aO35134 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Polr1aO35134 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Polr1aO35134 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC19.48■□□□□ 0.71
Polr1aO35134 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Polr1aO35134 Gm11628-201ENSMUST00000117568 171 ntBASIC19.48■□□□□ 0.71
Polr1aO35134 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC19.48■□□□□ 0.71
Polr1aO35134 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Polr1aO35134 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Polr1aO35134 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Polr1aO35134 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Polr1aO35134 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.47■□□□□ 0.71
Polr1aO35134 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Polr1aO35134 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Polr1aO35134 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Polr1aO35134 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Polr1aO35134 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Polr1aO35134 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Polr1aO35134 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Polr1aO35134 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Polr1aO35134 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Polr1aO35134 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Polr1aO35134 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Polr1aO35134 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Polr1aO35134 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Polr1aO35134 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Polr1aO35134 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Polr1aO35134 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Polr1aO35134 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
Polr1aO35134 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms