Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac1O09106 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Hdac1O09106 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac1O09106 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.36■□□□□ 0.05
Hdac1O09106 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac1O09106 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Hdac1O09106 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC15.36■□□□□ 0.05
Hdac1O09106 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC15.36■□□□□ 0.05
Hdac1O09106 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac1O09106 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac1O09106 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac1O09106 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac1O09106 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac1O09106 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac1O09106 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Hdac1O09106 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.36■□□□□ 0.05
Hdac1O09106 Gm6458-201ENSMUST00000211573 635 ntBASIC15.36■□□□□ 0.05
Hdac1O09106 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.36■□□□□ 0.05
Hdac1O09106 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC15.36■□□□□ 0.05
Hdac1O09106 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac1O09106 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac1O09106 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac1O09106 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Hdac1O09106 AC166574.4-201ENSMUST00000227165 1937 ntBASIC15.36■□□□□ 0.05
Hdac1O09106 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac1O09106 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac1O09106 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac1O09106 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac1O09106 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac1O09106 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac1O09106 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.36■□□□□ 0.05
Hdac1O09106 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac1O09106 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac1O09106 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac1O09106 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac1O09106 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac1O09106 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac1O09106 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac1O09106 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Hdac1O09106 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC15.35■□□□□ 0.05
Hdac1O09106 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac1O09106 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac1O09106 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Hdac1O09106 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac1O09106 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac1O09106 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Hdac1O09106 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac1O09106 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac1O09106 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC15.35■□□□□ 0.05
Hdac1O09106 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Hdac1O09106 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Hdac1O09106 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.35■□□□□ 0.05
Hdac1O09106 Gm19220-201ENSMUST00000222682 803 ntBASIC15.35■□□□□ 0.05
Hdac1O09106 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Hdac1O09106 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac1O09106 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac1O09106 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac1O09106 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac1O09106 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac1O09106 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac1O09106 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac1O09106 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac1O09106 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac1O09106 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac1O09106 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac1O09106 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac1O09106 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Hdac1O09106 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Hdac1O09106 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac1O09106 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac1O09106 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac1O09106 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac1O09106 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac1O09106 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC15.34■□□□□ 0.05
Hdac1O09106 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac1O09106 Gm43365-201ENSMUST00000196522 2106 ntBASIC15.34■□□□□ 0.05
Hdac1O09106 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac1O09106 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac1O09106 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac1O09106 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC15.34■□□□□ 0.05
Hdac1O09106 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
Hdac1O09106 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac1O09106 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac1O09106 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Hdac1O09106 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.34■□□□□ 0.05
Hdac1O09106 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Hdac1O09106 Mir7654-201ENSMUST00000185082 70 ntBASIC15.34■□□□□ 0.05
Hdac1O09106 Gm28693-202ENSMUST00000190758 331 ntBASIC15.34■□□□□ 0.05
Hdac1O09106 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.34■□□□□ 0.05
Hdac1O09106 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac1O09106 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.34■□□□□ 0.05
Hdac1O09106 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac1O09106 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.34■□□□□ 0.05
Hdac1O09106 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC15.34■□□□□ 0.05
Hdac1O09106 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac1O09106 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac1O09106 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Hdac1O09106 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Hdac1O09106 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac1O09106 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms