Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf11bO08712 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Tnfrsf11bO08712 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf11bO08712 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf11bO08712 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Gm13813-201ENSMUST00000120998 787 ntBASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Gm5866-201ENSMUST00000177881 973 ntBASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf11bO08712 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
Tnfrsf11bO08712 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfrsf11bO08712 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfrsf11bO08712 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Tnfrsf11bO08712 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfrsf11bO08712 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfrsf11bO08712 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.09□□□□□ -0.31
Tnfrsf11bO08712 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfrsf11bO08712 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfrsf11bO08712 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfrsf11bO08712 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfrsf11bO08712 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfrsf11bO08712 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.09□□□□□ -0.31
Tnfrsf11bO08712 Gm12291-201ENSMUST00000121627 311 ntBASIC13.09□□□□□ -0.31
Tnfrsf11bO08712 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms