Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ccdc180J3QNE4 Gm11450-201ENSMUST00000121144 333 ntBASIC23.19■■□□□ 1.3
Ccdc180J3QNE4 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC23.19■■□□□ 1.3
Ccdc180J3QNE4 Gm9550-201ENSMUST00000161130 862 ntBASIC23.19■■□□□ 1.3
Ccdc180J3QNE4 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ccdc180J3QNE4 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ccdc180J3QNE4 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc180J3QNE4 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc180J3QNE4 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc180J3QNE4 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc180J3QNE4 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc180J3QNE4 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc180J3QNE4 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc180J3QNE4 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc180J3QNE4 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc180J3QNE4 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc180J3QNE4 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC23.18■■□□□ 1.3
Ccdc180J3QNE4 Gm12196-201ENSMUST00000120954 262 ntBASIC23.18■■□□□ 1.3
Ccdc180J3QNE4 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC23.18■■□□□ 1.3
Ccdc180J3QNE4 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc180J3QNE4 Gm9211-201ENSMUST00000182882 975 ntBASIC23.18■■□□□ 1.3
Ccdc180J3QNE4 Gm27627-201ENSMUST00000183644 150 ntBASIC23.18■■□□□ 1.3
Ccdc180J3QNE4 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC23.18■■□□□ 1.3
Ccdc180J3QNE4 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc180J3QNE4 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc180J3QNE4 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc180J3QNE4 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc180J3QNE4 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc180J3QNE4 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc180J3QNE4 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc180J3QNE4 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc180J3QNE4 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc180J3QNE4 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc180J3QNE4 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc180J3QNE4 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc180J3QNE4 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc180J3QNE4 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Ccdc180J3QNE4 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Ccdc180J3QNE4 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc180J3QNE4 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC23.17■■□□□ 1.3
Ccdc180J3QNE4 Mir6546-201ENSMUST00000184460 62 ntBASIC23.17■■□□□ 1.3
Ccdc180J3QNE4 Gm44545-201ENSMUST00000208262 746 ntBASIC23.17■■□□□ 1.3
Ccdc180J3QNE4 Gm270-201ENSMUST00000223010 976 ntBASIC23.17■■□□□ 1.3
Ccdc180J3QNE4 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc180J3QNE4 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc180J3QNE4 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc180J3QNE4 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Ccdc180J3QNE4 Gm18626-201ENSMUST00000221512 1409 ntBASIC23.17■■□□□ 1.3
Ccdc180J3QNE4 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc180J3QNE4 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC23.17■■□□□ 1.3
Ccdc180J3QNE4 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Gm13035-201ENSMUST00000117496 342 ntBASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Gm29615-201ENSMUST00000185371 697 ntBASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Gm28224-201ENSMUST00000186078 697 ntBASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Gm29001-201ENSMUST00000186177 697 ntBASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Gm28292-201ENSMUST00000186593 697 ntBASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Gm28101-201ENSMUST00000187608 697 ntBASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Gm29076-201ENSMUST00000187689 697 ntBASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Gm28302-201ENSMUST00000187931 697 ntBASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Gm28646-201ENSMUST00000188220 697 ntBASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Gm28205-201ENSMUST00000189177 697 ntBASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Gm29032-201ENSMUST00000189797 697 ntBASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Gm28695-201ENSMUST00000190300 697 ntBASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Gm37448-201ENSMUST00000192795 697 ntBASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Gm45219-201ENSMUST00000205602 465 ntBASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc180J3QNE4 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc180J3QNE4 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc180J3QNE4 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc180J3QNE4 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Ccdc180J3QNE4 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc180J3QNE4 Gm43081-201ENSMUST00000199082 1380 ntBASIC23.15■■□□□ 1.3
Ccdc180J3QNE4 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc180J3QNE4 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc180J3QNE4 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc180J3QNE4 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC23.15■■□□□ 1.3
Ccdc180J3QNE4 Gm42997-202ENSMUST00000200321 985 ntBASIC23.15■■□□□ 1.3
Ccdc180J3QNE4 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC23.15■■□□□ 1.3
Ccdc180J3QNE4 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC23.15■■□□□ 1.3
Ccdc180J3QNE4 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc180J3QNE4 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc180J3QNE4 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms