Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Gm42863-201ENSMUST00000197875 2958 ntBASIC19.22■□□□□ 0.67
Pcf11G3X9Z4 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
Pcf11G3X9Z4 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcf11G3X9Z4 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcf11G3X9Z4 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcf11G3X9Z4 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcf11G3X9Z4 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC19.22■□□□□ 0.67
Pcf11G3X9Z4 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcf11G3X9Z4 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcf11G3X9Z4 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcf11G3X9Z4 Grk6-205ENSMUST00000224653 2976 ntBASIC19.22■□□□□ 0.67
Pcf11G3X9Z4 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcf11G3X9Z4 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcf11G3X9Z4 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Pcf11G3X9Z4 Gm12201-201ENSMUST00000120657 1234 ntBASIC19.22■□□□□ 0.67
Pcf11G3X9Z4 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC19.22■□□□□ 0.67
Pcf11G3X9Z4 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC19.22■□□□□ 0.67
Pcf11G3X9Z4 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC19.22■□□□□ 0.67
Pcf11G3X9Z4 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcf11G3X9Z4 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcf11G3X9Z4 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcf11G3X9Z4 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcf11G3X9Z4 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcf11G3X9Z4 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC19.22■□□□□ 0.67
Pcf11G3X9Z4 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcf11G3X9Z4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcf11G3X9Z4 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcf11G3X9Z4 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcf11G3X9Z4 AC159308.2-201ENSMUST00000213592 2325 ntBASIC19.21■□□□□ 0.67
Pcf11G3X9Z4 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcf11G3X9Z4 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcf11G3X9Z4 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Pcf11G3X9Z4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcf11G3X9Z4 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Pcf11G3X9Z4 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcf11G3X9Z4 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcf11G3X9Z4 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pcf11G3X9Z4 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC19.21■□□□□ 0.67
Pcf11G3X9Z4 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Pcf11G3X9Z4 Gm10371-202ENSMUST00000228010 1081 ntBASIC19.21■□□□□ 0.67
Pcf11G3X9Z4 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcf11G3X9Z4 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcf11G3X9Z4 Gm6781-201ENSMUST00000038304 1242 ntBASIC19.21■□□□□ 0.67
Pcf11G3X9Z4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Pcf11G3X9Z4 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcf11G3X9Z4 Gm43721-201ENSMUST00000199677 2313 ntBASIC19.21■□□□□ 0.67
Pcf11G3X9Z4 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcf11G3X9Z4 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcf11G3X9Z4 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcf11G3X9Z4 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcf11G3X9Z4 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcf11G3X9Z4 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcf11G3X9Z4 Gm44065-201ENSMUST00000203184 3527 ntBASIC19.21■□□□□ 0.66
Pcf11G3X9Z4 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Pcf11G3X9Z4 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Pcf11G3X9Z4 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcf11G3X9Z4 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcf11G3X9Z4 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcf11G3X9Z4 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Pcf11G3X9Z4 Gm23949-201ENSMUST00000104027 127 ntBASIC19.2■□□□□ 0.66
Pcf11G3X9Z4 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC19.2■□□□□ 0.66
Pcf11G3X9Z4 Gm12266-201ENSMUST00000120311 962 ntBASIC19.2■□□□□ 0.66
Pcf11G3X9Z4 H2-Q3-201ENSMUST00000172583 608 ntBASIC19.2■□□□□ 0.66
Pcf11G3X9Z4 Gm19353-201ENSMUST00000184561 445 ntBASIC19.2■□□□□ 0.66
Pcf11G3X9Z4 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcf11G3X9Z4 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Pcf11G3X9Z4 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcf11G3X9Z4 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcf11G3X9Z4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcf11G3X9Z4 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcf11G3X9Z4 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Gm15711-201ENSMUST00000118889 535 ntBASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Gm15782-201ENSMUST00000121073 445 ntBASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Gm29615-201ENSMUST00000185371 697 ntBASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Gm28224-201ENSMUST00000186078 697 ntBASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Gm29001-201ENSMUST00000186177 697 ntBASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Gm28292-201ENSMUST00000186593 697 ntBASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Gm28101-201ENSMUST00000187608 697 ntBASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Gm29076-201ENSMUST00000187689 697 ntBASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Gm28302-201ENSMUST00000187931 697 ntBASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Gm28646-201ENSMUST00000188220 697 ntBASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Gm28205-201ENSMUST00000189177 697 ntBASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Gm29032-201ENSMUST00000189797 697 ntBASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Gm28695-201ENSMUST00000190300 697 ntBASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Gm37448-201ENSMUST00000192795 697 ntBASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 AC148324.1-201ENSMUST00000219034 4240 ntBASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 442.5 ms