Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Gm3332-201ENSMUST00000189337 928 ntBASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Gm17877-201ENSMUST00000192578 814 ntBASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Gm5100-201ENSMUST00000195631 589 ntBASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc188F6WEU2 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Gm25998-201ENSMUST00000175397 53 ntBASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccdc188F6WEU2 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms