Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Gm27516-201ENSMUST00000184237 98 ntBASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Gm29396-201ENSMUST00000185659 716 ntBASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Gm18935-201ENSMUST00000212692 664 ntBASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Gm8227-201ENSMUST00000223306 571 ntBASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Gm37827-201ENSMUST00000194486 1542 ntBASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb9E9Q5G2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb9E9Q5G2 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb9E9Q5G2 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhb9E9Q5G2 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb9E9Q5G2 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb9E9Q5G2 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb9E9Q5G2 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb9E9Q5G2 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb9E9Q5G2 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb9E9Q5G2 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb9E9Q5G2 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb9E9Q5G2 Gm18222-201ENSMUST00000202416 1387 ntBASIC15.16■□□□□ 0.02
Pcdhb9E9Q5G2 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb9E9Q5G2 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhb9E9Q5G2 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb9E9Q5G2 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhb9E9Q5G2 Mospd4-201ENSMUST00000180618 576 ntBASIC15.16■□□□□ 0.02
Pcdhb9E9Q5G2 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC15.16■□□□□ 0.02
Pcdhb9E9Q5G2 Gm10608-202ENSMUST00000213924 676 ntBASIC15.16■□□□□ 0.02
Pcdhb9E9Q5G2 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb9E9Q5G2 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb9E9Q5G2 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb9E9Q5G2 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb9E9Q5G2 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb9E9Q5G2 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb9E9Q5G2 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Pcdhb9E9Q5G2 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb9E9Q5G2 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 Gm13492-201ENSMUST00000119772 665 ntBASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 Gm7046-201ENSMUST00000221351 977 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms