Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Gm18256-201ENSMUST00000209087 907 ntBASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Gm3726-201ENSMUST00000203110 785 ntBASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Rps3a2-201ENSMUST00000074245 792 ntBASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Rps3a3-201ENSMUST00000074680 795 ntBASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a3E9PWQ3 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Gm15004-201ENSMUST00000119192 630 ntBASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Gm42430-201ENSMUST00000197209 616 ntBASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Gm43184-201ENSMUST00000197247 542 ntBASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Gm11509-201ENSMUST00000117358 325 ntBASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a3E9PWQ3 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Gm23400-201ENSMUST00000174994 102 ntBASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Gm26463-201ENSMUST00000175065 101 ntBASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Gm24332-201ENSMUST00000175102 102 ntBASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Gm25959-201ENSMUST00000175112 102 ntBASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Gm22475-201ENSMUST00000175169 102 ntBASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Gm22903-201ENSMUST00000175193 102 ntBASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Gm25070-201ENSMUST00000175237 102 ntBASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Gm24159-201ENSMUST00000175264 102 ntBASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Gm25299-201ENSMUST00000175283 102 ntBASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Gm23798-201ENSMUST00000175560 102 ntBASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Gm23802-201ENSMUST00000175565 102 ntBASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Gm25708-201ENSMUST00000177687 102 ntBASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Gm24370-201ENSMUST00000178007 102 ntBASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Gm23049-201ENSMUST00000178068 102 ntBASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Gm28019-201ENSMUST00000178138 101 ntBASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Gm25571-201ENSMUST00000178322 102 ntBASIC12.52□□□□□ -0.4
Col6a3E9PWQ3 Gm25355-201ENSMUST00000178456 101 ntBASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms