Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trim30cD3YVI9 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Gm44719-201ENSMUST00000206404 149 ntBASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim30cD3YVI9 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trim30cD3YVI9 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Gm15770-201ENSMUST00000117498 584 ntBASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Gm11478-201ENSMUST00000117851 599 ntBASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Gm38116-201ENSMUST00000193873 1533 ntBASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim30cD3YVI9 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.14□□□□□ -0.15
Trim30cD3YVI9 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim30cD3YVI9 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim30cD3YVI9 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim30cD3YVI9 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim30cD3YVI9 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim30cD3YVI9 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim30cD3YVI9 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim30cD3YVI9 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim30cD3YVI9 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim30cD3YVI9 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.13□□□□□ -0.15
Trim30cD3YVI9 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim30cD3YVI9 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms