Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Tmf1B9EKI3 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Tmf1B9EKI3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tmf1B9EKI3 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tmf1B9EKI3 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tmf1B9EKI3 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tmf1B9EKI3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Tmf1B9EKI3 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tmf1B9EKI3 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Tmf1B9EKI3 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tmf1B9EKI3 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Tmf1B9EKI3 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Tmf1B9EKI3 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tmf1B9EKI3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Tmf1B9EKI3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tmf1B9EKI3 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tmf1B9EKI3 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tmf1B9EKI3 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC17.47■□□□□ 0.39
Tmf1B9EKI3 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tmf1B9EKI3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC17.47■□□□□ 0.39
Tmf1B9EKI3 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC17.47■□□□□ 0.39
Tmf1B9EKI3 Rn7s1-201ENSMUST00000174924 300 ntBASIC17.47■□□□□ 0.39
Tmf1B9EKI3 Rn7s2-201ENSMUST00000175032 300 ntBASIC17.47■□□□□ 0.39
Tmf1B9EKI3 Gm26461-201ENSMUST00000175064 290 ntBASIC17.47■□□□□ 0.39
Tmf1B9EKI3 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tmf1B9EKI3 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC17.47■□□□□ 0.39
Tmf1B9EKI3 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC17.47■□□□□ 0.39
Tmf1B9EKI3 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC17.47■□□□□ 0.39
Tmf1B9EKI3 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC17.47■□□□□ 0.39
Tmf1B9EKI3 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Tmf1B9EKI3 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Tmf1B9EKI3 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tmf1B9EKI3 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tmf1B9EKI3 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tmf1B9EKI3 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tmf1B9EKI3 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tmf1B9EKI3 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tmf1B9EKI3 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tmf1B9EKI3 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tmf1B9EKI3 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tmf1B9EKI3 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tmf1B9EKI3 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Tmf1B9EKI3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tmf1B9EKI3 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tmf1B9EKI3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Tmf1B9EKI3 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC17.46■□□□□ 0.39
Tmf1B9EKI3 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tmf1B9EKI3 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tmf1B9EKI3 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tmf1B9EKI3 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC17.46■□□□□ 0.39
Tmf1B9EKI3 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tmf1B9EKI3 Gm13492-201ENSMUST00000119772 665 ntBASIC17.46■□□□□ 0.39
Tmf1B9EKI3 Gm13786-201ENSMUST00000122371 333 ntBASIC17.46■□□□□ 0.39
Tmf1B9EKI3 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Tmf1B9EKI3 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC17.46■□□□□ 0.39
Tmf1B9EKI3 Gm16296-201ENSMUST00000159905 325 ntBASIC17.46■□□□□ 0.39
Tmf1B9EKI3 Gm43822-201ENSMUST00000200285 476 ntBASIC17.46■□□□□ 0.39
Tmf1B9EKI3 AC132317.1-201ENSMUST00000227227 962 ntBASIC17.46■□□□□ 0.39
Tmf1B9EKI3 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Tmf1B9EKI3 Gm24526-201ENSMUST00000082921 158 ntBASIC17.46■□□□□ 0.39
Tmf1B9EKI3 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tmf1B9EKI3 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tmf1B9EKI3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tmf1B9EKI3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC17.46■□□□□ 0.39
Tmf1B9EKI3 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tmf1B9EKI3 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tmf1B9EKI3 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tmf1B9EKI3 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Tmf1B9EKI3 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Tmf1B9EKI3 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tmf1B9EKI3 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tmf1B9EKI3 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tmf1B9EKI3 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tmf1B9EKI3 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tmf1B9EKI3 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tmf1B9EKI3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tmf1B9EKI3 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC17.45■□□□□ 0.38
Tmf1B9EKI3 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
Tmf1B9EKI3 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tmf1B9EKI3 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tmf1B9EKI3 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tmf1B9EKI3 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tmf1B9EKI3 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tmf1B9EKI3 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tmf1B9EKI3 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC17.45■□□□□ 0.38
Tmf1B9EKI3 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC17.45■□□□□ 0.38
Tmf1B9EKI3 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC17.45■□□□□ 0.38
Tmf1B9EKI3 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC17.45■□□□□ 0.38
Tmf1B9EKI3 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC17.45■□□□□ 0.38
Tmf1B9EKI3 Gm27501-201ENSMUST00000183599 107 ntBASIC17.45■□□□□ 0.38
Tmf1B9EKI3 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC17.45■□□□□ 0.38
Tmf1B9EKI3 Olfr284-202ENSMUST00000206647 966 ntBASIC17.45■□□□□ 0.38
Tmf1B9EKI3 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC17.45■□□□□ 0.38
Tmf1B9EKI3 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC17.45■□□□□ 0.38
Tmf1B9EKI3 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC17.45■□□□□ 0.38
Tmf1B9EKI3 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tmf1B9EKI3 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tmf1B9EKI3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tmf1B9EKI3 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tmf1B9EKI3 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms