Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip3B9EHT4 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.61□□□□□ -0.39
Clip3B9EHT4 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Gm5687-201ENSMUST00000118252 640 ntBASIC12.6□□□□□ -0.39
Clip3B9EHT4 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clip3B9EHT4 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Proscos-202ENSMUST00000178990 666 ntBASIC12.6□□□□□ -0.39
Clip3B9EHT4 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.6□□□□□ -0.39
Clip3B9EHT4 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Map1b-203ENSMUST00000223725 2669 ntBASIC12.6□□□□□ -0.39
Clip3B9EHT4 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip3B9EHT4 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.6□□□□□ -0.39
Clip3B9EHT4 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip3B9EHT4 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip3B9EHT4 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clip3B9EHT4 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.59□□□□□ -0.39
Clip3B9EHT4 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.59□□□□□ -0.39
Clip3B9EHT4 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clip3B9EHT4 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Clip3B9EHT4 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip3B9EHT4 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clip3B9EHT4 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clip3B9EHT4 Gm13369-201ENSMUST00000119442 987 ntBASIC12.59□□□□□ -0.39
Clip3B9EHT4 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Clip3B9EHT4 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.59□□□□□ -0.39
Clip3B9EHT4 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip3B9EHT4 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip3B9EHT4 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Clip3B9EHT4 Gm16372-201ENSMUST00000073088 450 ntBASIC12.59□□□□□ -0.39
Clip3B9EHT4 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip3B9EHT4 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clip3B9EHT4 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip3B9EHT4 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Clip3B9EHT4 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Clip3B9EHT4 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip3B9EHT4 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip3B9EHT4 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip3B9EHT4 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip3B9EHT4 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip3B9EHT4 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip3B9EHT4 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip3B9EHT4 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.59□□□□□ -0.39
Clip3B9EHT4 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clip3B9EHT4 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Clip3B9EHT4 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip3B9EHT4 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Clip3B9EHT4 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Clip3B9EHT4 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Clip3B9EHT4 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
Clip3B9EHT4 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Clip3B9EHT4 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Clip3B9EHT4 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Clip3B9EHT4 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Clip3B9EHT4 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Clip3B9EHT4 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.58□□□□□ -0.4
Clip3B9EHT4 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Clip3B9EHT4 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip3B9EHT4 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Clip3B9EHT4 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip3B9EHT4 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip3B9EHT4 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Clip3B9EHT4 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip3B9EHT4 Gm13226-201ENSMUST00000117838 404 ntBASIC12.58□□□□□ -0.4
Clip3B9EHT4 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.58□□□□□ -0.4
Clip3B9EHT4 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.58□□□□□ -0.4
Clip3B9EHT4 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Clip3B9EHT4 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.58□□□□□ -0.4
Clip3B9EHT4 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.58□□□□□ -0.4
Clip3B9EHT4 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip3B9EHT4 Gm24196-201ENSMUST00000179161 110 ntBASIC12.58□□□□□ -0.4
Clip3B9EHT4 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms