Protein–RNA interactions for Protein: B4XVP9

Phf11c, PHD finger protein 11C, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf11cB4XVP9 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.24□□□□□ -0.45
Phf11cB4XVP9 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Syt7-204ENSMUST00000223586 1344 ntBASIC12.24□□□□□ -0.45
Phf11cB4XVP9 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Phf11cB4XVP9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Phf11cB4XVP9 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Phf11cB4XVP9 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Phf11cB4XVP9 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Phf11cB4XVP9 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Phf11cB4XVP9 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Phf11cB4XVP9 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Phf11cB4XVP9 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Phf11cB4XVP9 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Phf11cB4XVP9 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Phf11cB4XVP9 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Phf11cB4XVP9 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Phf11cB4XVP9 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Phf11cB4XVP9 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Phf11cB4XVP9 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.22□□□□□ -0.45
Phf11cB4XVP9 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Phf11cB4XVP9 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Phf11cB4XVP9 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Phf11cB4XVP9 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Phf11cB4XVP9 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Phf11cB4XVP9 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Phf11cB4XVP9 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Phf11cB4XVP9 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Phf11cB4XVP9 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Phf11cB4XVP9 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Phf11cB4XVP9 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Phf11cB4XVP9 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Phf11cB4XVP9 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Phf11cB4XVP9 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms