Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm23085-201ENSMUST00000157849 293 ntBASIC13.02□□□□□ -0.32
Col4a6B1AVK5 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.02□□□□□ -0.32
Col4a6B1AVK5 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Col4a6B1AVK5 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC13.02□□□□□ -0.32
Col4a6B1AVK5 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.02□□□□□ -0.32
Col4a6B1AVK5 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC13.02□□□□□ -0.32
Col4a6B1AVK5 Gm3332-201ENSMUST00000189337 928 ntBASIC13.02□□□□□ -0.32
Col4a6B1AVK5 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col4a6B1AVK5 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col4a6B1AVK5 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC13.02□□□□□ -0.32
Col4a6B1AVK5 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col4a6B1AVK5 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Col4a6B1AVK5 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col4a6B1AVK5 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col4a6B1AVK5 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC13.02□□□□□ -0.32
Col4a6B1AVK5 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.02□□□□□ -0.32
Col4a6B1AVK5 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col4a6B1AVK5 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col4a6B1AVK5 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col4a6B1AVK5 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.02□□□□□ -0.32
Col4a6B1AVK5 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col4a6B1AVK5 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col4a6B1AVK5 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col4a6B1AVK5 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col4a6B1AVK5 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.02□□□□□ -0.33
Col4a6B1AVK5 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col4a6B1AVK5 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col4a6B1AVK5 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col4a6B1AVK5 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col4a6B1AVK5 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col4a6B1AVK5 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.02□□□□□ -0.33
Col4a6B1AVK5 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC13.02□□□□□ -0.33
Col4a6B1AVK5 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col4a6B1AVK5 Gm5733-201ENSMUST00000190232 939 ntBASIC13.02□□□□□ -0.33
Col4a6B1AVK5 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.02□□□□□ -0.33
Col4a6B1AVK5 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col4a6B1AVK5 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Col4a6B1AVK5 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col4a6B1AVK5 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col4a6B1AVK5 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Col4a6B1AVK5 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col4a6B1AVK5 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col4a6B1AVK5 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col4a6B1AVK5 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col4a6B1AVK5 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col4a6B1AVK5 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col4a6B1AVK5 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Col4a6B1AVK5 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col4a6B1AVK5 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col4a6B1AVK5 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col4a6B1AVK5 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Col4a6B1AVK5 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col4a6B1AVK5 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Col4a6B1AVK5 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.01□□□□□ -0.33
Col4a6B1AVK5 Gm14760-201ENSMUST00000121831 999 ntBASIC13.01□□□□□ -0.33
Col4a6B1AVK5 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Col4a6B1AVK5 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC13.01□□□□□ -0.33
Col4a6B1AVK5 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.01□□□□□ -0.33
Col4a6B1AVK5 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col4a6B1AVK5 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col4a6B1AVK5 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.01□□□□□ -0.33
Col4a6B1AVK5 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col4a6B1AVK5 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Col4a6B1AVK5 Gm9072-201ENSMUST00000218390 1514 ntBASIC13.01□□□□□ -0.33
Col4a6B1AVK5 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col4a6B1AVK5 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col4a6B1AVK5 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col4a6B1AVK5 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col4a6B1AVK5 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col4a6B1AVK5 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col4a6B1AVK5 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Col4a6B1AVK5 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13□□□□□ -0.33
Col4a6B1AVK5 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col4a6B1AVK5 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col4a6B1AVK5 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col4a6B1AVK5 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Col4a6B1AVK5 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col4a6B1AVK5 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13□□□□□ -0.33
Col4a6B1AVK5 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col4a6B1AVK5 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Col4a6B1AVK5 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col4a6B1AVK5 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Col4a6B1AVK5 Gm10774-201ENSMUST00000188689 204 ntBASIC13□□□□□ -0.33
Col4a6B1AVK5 Gm37905-201ENSMUST00000195310 341 ntBASIC13□□□□□ -0.33
Col4a6B1AVK5 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col4a6B1AVK5 Gm19287-201ENSMUST00000203190 358 ntBASIC13□□□□□ -0.33
Col4a6B1AVK5 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13□□□□□ -0.33
Col4a6B1AVK5 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col4a6B1AVK5 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col4a6B1AVK5 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col4a6B1AVK5 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col4a6B1AVK5 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col4a6B1AVK5 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13□□□□□ -0.33
Col4a6B1AVK5 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col4a6B1AVK5 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col4a6B1AVK5 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Col4a6B1AVK5 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col4a6B1AVK5 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col4a6B1AVK5 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col4a6B1AVK5 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms