Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.9□□□□□ -0.66
Col6a4A2AX52 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a4A2AX52 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.9□□□□□ -0.66
Col6a4A2AX52 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.9□□□□□ -0.66
Col6a4A2AX52 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Col6a4A2AX52 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col6a4A2AX52 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
Col6a4A2AX52 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Col6a4A2AX52 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.9□□□□□ -0.67
Col6a4A2AX52 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Col6a4A2AX52 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.9□□□□□ -0.67
Col6a4A2AX52 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.9□□□□□ -0.67
Col6a4A2AX52 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.9□□□□□ -0.67
Col6a4A2AX52 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col6a4A2AX52 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col6a4A2AX52 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Col6a4A2AX52 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col6a4A2AX52 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col6a4A2AX52 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col6a4A2AX52 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Col6a4A2AX52 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col6a4A2AX52 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col6a4A2AX52 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Gm44981-201ENSMUST00000205549 1943 ntBASIC10.89□□□□□ -0.67
Col6a4A2AX52 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.89□□□□□ -0.67
Col6a4A2AX52 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Gm13996-201ENSMUST00000118456 430 ntBASIC10.89□□□□□ -0.67
Col6a4A2AX52 Gm8194-201ENSMUST00000159783 859 ntBASIC10.89□□□□□ -0.67
Col6a4A2AX52 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Gm45770-201ENSMUST00000212105 616 ntBASIC10.89□□□□□ -0.67
Col6a4A2AX52 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Col6a4A2AX52 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a4A2AX52 Gm27438-201ENSMUST00000183480 110 ntBASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms