Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trbv29A0A0G2LB96 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trbv29A0A0G2LB96 Hist1h2al-201ENSMUST00000091708 339 ntBASIC10.74□□□□□ -0.69
Trbv29A0A0G2LB96 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trbv29A0A0G2LB96 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trbv29A0A0G2LB96 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Trbv29A0A0G2LB96 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trbv29A0A0G2LB96 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trbv29A0A0G2LB96 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.74□□□□□ -0.69
Trbv29A0A0G2LB96 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trbv29A0A0G2LB96 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Trbv29A0A0G2LB96 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trbv29A0A0G2LB96 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trbv29A0A0G2LB96 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.74□□□□□ -0.69
Trbv29A0A0G2LB96 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.74□□□□□ -0.69
Trbv29A0A0G2LB96 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.74□□□□□ -0.69
Trbv29A0A0G2LB96 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Gm15371-201ENSMUST00000117057 784 ntBASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Gm24694-201ENSMUST00000180054 110 ntBASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Gm27663-201ENSMUST00000184839 110 ntBASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trbv29A0A0G2LB96 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Mir686-201ENSMUST00000102174 109 ntBASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Mir7684-201ENSMUST00000183858 60 ntBASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Gm31326-201ENSMUST00000191856 1048 ntBASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 AC139382.1-201ENSMUST00000221402 498 ntBASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 AC132863.2-201ENSMUST00000226643 799 ntBASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms