Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Gm13332-201ENSMUST00000120451 1398 ntBASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm13015-201ENSMUST00000118674 204 ntBASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm33320-201ENSMUST00000192232 530 ntBASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm16476-201ENSMUST00000221544 139 ntBASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm44401-201ENSMUST00000204462 2375 ntBASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 AC159195.1-201ENSMUST00000225867 2086 ntBASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm44292-201ENSMUST00000205194 2364 ntBASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Mir6990-201ENSMUST00000183724 91 ntBASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm4971-201ENSMUST00000205991 1108 ntBASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Dupd1-202ENSMUST00000224735 548 ntBASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm45667-201ENSMUST00000210380 1316 ntBASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 AC153506.1-201ENSMUST00000218768 2915 ntBASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC9.78□□□□□ -0.84
Trav3n-3A0A0G2JEM0 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms