Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
H2afb3S4R1G7 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.96■□□□□ 0.63
H2afb3S4R1G7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
H2afb3S4R1G7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
H2afb3S4R1G7 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
H2afb3S4R1G7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
H2afb3S4R1G7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
H2afb3S4R1G7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
H2afb3S4R1G7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb3S4R1G7 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb3S4R1G7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb3S4R1G7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb3S4R1G7 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb3S4R1G7 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.95■□□□□ 0.62
H2afb3S4R1G7 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb3S4R1G7 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.94■□□□□ 0.62
H2afb3S4R1G7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
H2afb3S4R1G7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
H2afb3S4R1G7 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.94■□□□□ 0.62
H2afb3S4R1G7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.94■□□□□ 0.62
H2afb3S4R1G7 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
H2afb3S4R1G7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
H2afb3S4R1G7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.94■□□□□ 0.62
H2afb3S4R1G7 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
H2afb3S4R1G7 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
H2afb3S4R1G7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
H2afb3S4R1G7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
H2afb3S4R1G7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
H2afb3S4R1G7 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
H2afb3S4R1G7 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
H2afb3S4R1G7 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
H2afb3S4R1G7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
H2afb3S4R1G7 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
H2afb3S4R1G7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.92■□□□□ 0.62
H2afb3S4R1G7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
H2afb3S4R1G7 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.92■□□□□ 0.62
H2afb3S4R1G7 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
H2afb3S4R1G7 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
H2afb3S4R1G7 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
H2afb3S4R1G7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.92■□□□□ 0.62
H2afb3S4R1G7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
H2afb3S4R1G7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
H2afb3S4R1G7 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
H2afb3S4R1G7 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
H2afb3S4R1G7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.91■□□□□ 0.62
H2afb3S4R1G7 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
H2afb3S4R1G7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
H2afb3S4R1G7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
H2afb3S4R1G7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
H2afb3S4R1G7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
H2afb3S4R1G7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
H2afb3S4R1G7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
H2afb3S4R1G7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
H2afb3S4R1G7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
H2afb3S4R1G7 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.9■□□□□ 0.62
H2afb3S4R1G7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
H2afb3S4R1G7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H2afb3S4R1G7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
H2afb3S4R1G7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
H2afb3S4R1G7 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
H2afb3S4R1G7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
H2afb3S4R1G7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
H2afb3S4R1G7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
H2afb3S4R1G7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
H2afb3S4R1G7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
H2afb3S4R1G7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
H2afb3S4R1G7 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
H2afb3S4R1G7 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H2afb3S4R1G7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H2afb3S4R1G7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H2afb3S4R1G7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
H2afb3S4R1G7 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
H2afb3S4R1G7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H2afb3S4R1G7 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H2afb3S4R1G7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.87■□□□□ 0.61
H2afb3S4R1G7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H2afb3S4R1G7 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H2afb3S4R1G7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H2afb3S4R1G7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H2afb3S4R1G7 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
H2afb3S4R1G7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
H2afb3S4R1G7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.86■□□□□ 0.61
H2afb3S4R1G7 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
H2afb3S4R1G7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
H2afb3S4R1G7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
H2afb3S4R1G7 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.86■□□□□ 0.61
H2afb3S4R1G7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
H2afb3S4R1G7 Gm14523-201ENSMUST00000117260 558 ntBASIC18.86■□□□□ 0.61
H2afb3S4R1G7 Gm27502-201ENSMUST00000183495 199 ntBASIC18.86■□□□□ 0.61
H2afb3S4R1G7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
H2afb3S4R1G7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.85■□□□□ 0.61
H2afb3S4R1G7 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.85■□□□□ 0.61
H2afb3S4R1G7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.85■□□□□ 0.61
H2afb3S4R1G7 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
H2afb3S4R1G7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
H2afb3S4R1G7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
H2afb3S4R1G7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
H2afb3S4R1G7 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
H2afb3S4R1G7 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
H2afb3S4R1G7 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms