Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Scn8aQ9WTU3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Scn8aQ9WTU3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Scn8aQ9WTU3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Scn8aQ9WTU3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Scn8aQ9WTU3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Scn8aQ9WTU3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Scn8aQ9WTU3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scn8aQ9WTU3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Scn8aQ9WTU3 Gm40881-201ENSMUST00000223397 166 ntBASIC21.66■■□□□ 1.06
Scn8aQ9WTU3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Scn8aQ9WTU3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Scn8aQ9WTU3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scn8aQ9WTU3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Scn8aQ9WTU3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Scn8aQ9WTU3 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.65■■□□□ 1.06
Scn8aQ9WTU3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scn8aQ9WTU3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scn8aQ9WTU3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Scn8aQ9WTU3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Scn8aQ9WTU3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scn8aQ9WTU3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Scn8aQ9WTU3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scn8aQ9WTU3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scn8aQ9WTU3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn8aQ9WTU3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn8aQ9WTU3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn8aQ9WTU3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.63■■□□□ 1.05
Scn8aQ9WTU3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn8aQ9WTU3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Scn8aQ9WTU3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn8aQ9WTU3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Scn8aQ9WTU3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.62■■□□□ 1.05
Scn8aQ9WTU3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scn8aQ9WTU3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.62■■□□□ 1.05
Scn8aQ9WTU3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Scn8aQ9WTU3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Scn8aQ9WTU3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.61■■□□□ 1.05
Scn8aQ9WTU3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.61■■□□□ 1.05
Scn8aQ9WTU3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scn8aQ9WTU3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scn8aQ9WTU3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.61■■□□□ 1.05
Scn8aQ9WTU3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
Scn8aQ9WTU3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Scn8aQ9WTU3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn8aQ9WTU3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.59■■□□□ 1.05
Scn8aQ9WTU3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scn8aQ9WTU3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scn8aQ9WTU3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.59■■□□□ 1.05
Scn8aQ9WTU3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scn8aQ9WTU3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scn8aQ9WTU3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scn8aQ9WTU3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scn8aQ9WTU3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scn8aQ9WTU3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Scn8aQ9WTU3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scn8aQ9WTU3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scn8aQ9WTU3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.58■■□□□ 1.05
Scn8aQ9WTU3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scn8aQ9WTU3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Scn8aQ9WTU3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scn8aQ9WTU3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scn8aQ9WTU3 Gm22238-201ENSMUST00000175222 88 ntBASIC21.57■■□□□ 1.04
Scn8aQ9WTU3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.57■■□□□ 1.04
Scn8aQ9WTU3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scn8aQ9WTU3 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scn8aQ9WTU3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Scn8aQ9WTU3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Scn8aQ9WTU3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.56■■□□□ 1.04
Scn8aQ9WTU3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Scn8aQ9WTU3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.56■■□□□ 1.04
Scn8aQ9WTU3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Scn8aQ9WTU3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scn8aQ9WTU3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Scn8aQ9WTU3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.55■■□□□ 1.04
Scn8aQ9WTU3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scn8aQ9WTU3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.54■■□□□ 1.04
Scn8aQ9WTU3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Scn8aQ9WTU3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn8aQ9WTU3 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.54■■□□□ 1.04
Scn8aQ9WTU3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Scn8aQ9WTU3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn8aQ9WTU3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn8aQ9WTU3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Scn8aQ9WTU3 Etf1-202ENSMUST00000180351 108 ntBASIC21.54■■□□□ 1.04
Scn8aQ9WTU3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.54■■□□□ 1.04
Scn8aQ9WTU3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn8aQ9WTU3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Scn8aQ9WTU3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Scn8aQ9WTU3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Scn8aQ9WTU3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scn8aQ9WTU3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scn8aQ9WTU3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scn8aQ9WTU3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scn8aQ9WTU3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Scn8aQ9WTU3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Scn8aQ9WTU3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scn8aQ9WTU3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Scn8aQ9WTU3 Gm7417-201ENSMUST00000192950 473 ntBASIC21.52■■□□□ 1.04
Scn8aQ9WTU3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms