Protein–RNA interactions for Protein: Q9ERH8

Slc28a3, Solute carrier family 28 member 3, mousemouse

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a3Q9ERH8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc28a3Q9ERH8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc28a3Q9ERH8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Slc28a3Q9ERH8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.68■□□□□ 0.9
Slc28a3Q9ERH8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc28a3Q9ERH8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc28a3Q9ERH8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Slc28a3Q9ERH8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.67■□□□□ 0.9
Slc28a3Q9ERH8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.67■□□□□ 0.9
Slc28a3Q9ERH8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.67■□□□□ 0.9
Slc28a3Q9ERH8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.67■□□□□ 0.9
Slc28a3Q9ERH8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc28a3Q9ERH8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Slc28a3Q9ERH8 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.67■□□□□ 0.9
Slc28a3Q9ERH8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Slc28a3Q9ERH8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc28a3Q9ERH8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc28a3Q9ERH8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.66■□□□□ 0.9
Slc28a3Q9ERH8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Slc28a3Q9ERH8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc28a3Q9ERH8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc28a3Q9ERH8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Slc28a3Q9ERH8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Slc28a3Q9ERH8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Slc28a3Q9ERH8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.65■□□□□ 0.9
Slc28a3Q9ERH8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Slc28a3Q9ERH8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Slc28a3Q9ERH8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Slc28a3Q9ERH8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
Slc28a3Q9ERH8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Slc28a3Q9ERH8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Slc28a3Q9ERH8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Slc28a3Q9ERH8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc28a3Q9ERH8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc28a3Q9ERH8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Slc28a3Q9ERH8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Slc28a3Q9ERH8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Slc28a3Q9ERH8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc28a3Q9ERH8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slc28a3Q9ERH8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.63■□□□□ 0.89
Slc28a3Q9ERH8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc28a3Q9ERH8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Slc28a3Q9ERH8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc28a3Q9ERH8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slc28a3Q9ERH8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc28a3Q9ERH8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slc28a3Q9ERH8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Slc28a3Q9ERH8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc28a3Q9ERH8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Slc28a3Q9ERH8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.61■□□□□ 0.89
Slc28a3Q9ERH8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc28a3Q9ERH8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc28a3Q9ERH8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc28a3Q9ERH8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Slc28a3Q9ERH8 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.61■□□□□ 0.89
Slc28a3Q9ERH8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc28a3Q9ERH8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Slc28a3Q9ERH8 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.6■□□□□ 0.89
Slc28a3Q9ERH8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Slc28a3Q9ERH8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc28a3Q9ERH8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc28a3Q9ERH8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc28a3Q9ERH8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc28a3Q9ERH8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc28a3Q9ERH8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Slc28a3Q9ERH8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc28a3Q9ERH8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.59■□□□□ 0.89
Slc28a3Q9ERH8 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc28a3Q9ERH8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc28a3Q9ERH8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Slc28a3Q9ERH8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.59■□□□□ 0.89
Slc28a3Q9ERH8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.59■□□□□ 0.89
Slc28a3Q9ERH8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.59■□□□□ 0.89
Slc28a3Q9ERH8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc28a3Q9ERH8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc28a3Q9ERH8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Slc28a3Q9ERH8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc28a3Q9ERH8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc28a3Q9ERH8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc28a3Q9ERH8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Slc28a3Q9ERH8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc28a3Q9ERH8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Slc28a3Q9ERH8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Slc28a3Q9ERH8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc28a3Q9ERH8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc28a3Q9ERH8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc28a3Q9ERH8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Slc28a3Q9ERH8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc28a3Q9ERH8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Slc28a3Q9ERH8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc28a3Q9ERH8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc28a3Q9ERH8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Slc28a3Q9ERH8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Slc28a3Q9ERH8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.57■□□□□ 0.88
Slc28a3Q9ERH8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.57■□□□□ 0.88
Slc28a3Q9ERH8 Gm5921-201ENSMUST00000075898 882 ntBASIC20.57■□□□□ 0.88
Slc28a3Q9ERH8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.57■□□□□ 0.88
Slc28a3Q9ERH8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc28a3Q9ERH8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc28a3Q9ERH8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms