Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdc40Q9DC48 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cdc40Q9DC48 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdc40Q9DC48 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Cdc40Q9DC48 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Cdc40Q9DC48 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdc40Q9DC48 Gm45102-201ENSMUST00000207427 857 ntBASIC19.56■□□□□ 0.72
Cdc40Q9DC48 Gm9959-201ENSMUST00000068277 390 ntBASIC19.56■□□□□ 0.72
Cdc40Q9DC48 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.56■□□□□ 0.72
Cdc40Q9DC48 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Cdc40Q9DC48 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cdc40Q9DC48 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdc40Q9DC48 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cdc40Q9DC48 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdc40Q9DC48 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdc40Q9DC48 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdc40Q9DC48 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdc40Q9DC48 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdc40Q9DC48 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdc40Q9DC48 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cdc40Q9DC48 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdc40Q9DC48 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdc40Q9DC48 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdc40Q9DC48 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdc40Q9DC48 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdc40Q9DC48 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdc40Q9DC48 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdc40Q9DC48 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdc40Q9DC48 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdc40Q9DC48 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.54■□□□□ 0.72
Cdc40Q9DC48 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Cdc40Q9DC48 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdc40Q9DC48 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdc40Q9DC48 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdc40Q9DC48 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdc40Q9DC48 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdc40Q9DC48 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cdc40Q9DC48 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Cdc40Q9DC48 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cdc40Q9DC48 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdc40Q9DC48 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdc40Q9DC48 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdc40Q9DC48 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cdc40Q9DC48 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cdc40Q9DC48 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Cdc40Q9DC48 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Cdc40Q9DC48 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Cdc40Q9DC48 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cdc40Q9DC48 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdc40Q9DC48 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cdc40Q9DC48 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Cdc40Q9DC48 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cdc40Q9DC48 Etf1-202ENSMUST00000180351 108 ntBASIC19.51■□□□□ 0.71
Cdc40Q9DC48 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdc40Q9DC48 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cdc40Q9DC48 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.51■□□□□ 0.71
Cdc40Q9DC48 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdc40Q9DC48 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdc40Q9DC48 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdc40Q9DC48 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cdc40Q9DC48 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cdc40Q9DC48 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.5■□□□□ 0.71
Cdc40Q9DC48 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.5■□□□□ 0.71
Cdc40Q9DC48 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdc40Q9DC48 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdc40Q9DC48 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdc40Q9DC48 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Cdc40Q9DC48 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdc40Q9DC48 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Cdc40Q9DC48 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdc40Q9DC48 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Cdc40Q9DC48 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdc40Q9DC48 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.49■□□□□ 0.71
Cdc40Q9DC48 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Cdc40Q9DC48 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cdc40Q9DC48 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdc40Q9DC48 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdc40Q9DC48 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdc40Q9DC48 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cdc40Q9DC48 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Cdc40Q9DC48 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdc40Q9DC48 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdc40Q9DC48 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Cdc40Q9DC48 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Cdc40Q9DC48 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdc40Q9DC48 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdc40Q9DC48 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Cdc40Q9DC48 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdc40Q9DC48 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cdc40Q9DC48 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cdc40Q9DC48 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cdc40Q9DC48 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdc40Q9DC48 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cdc40Q9DC48 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.47■□□□□ 0.71
Cdc40Q9DC48 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cdc40Q9DC48 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.47■□□□□ 0.71
Cdc40Q9DC48 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdc40Q9DC48 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cdc40Q9DC48 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.46■□□□□ 0.71
Cdc40Q9DC48 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms